Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP4O75379 HMGN1P28-201ENST00000521340 364 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AC100870.1-201ENST00000522035 505 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AP005597.4-201ENST00000526762 229 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP4O75379 MIR4293-201ENST00000584305 78 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AC006130.2-201ENST00000586202 326 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.89□□□□□ -1.63
VAMP4O75379 AC010680.4-201ENST00000605334 543 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AL162730.1-201ENST00000605734 292 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AL133215.3-201ENST00000609801 448 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AL133216.2-202ENST00000634512 349 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP4O75379 AC018529.3-201ENST00000624212 2254 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VAMP4O75379 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.88□□□□□ -1.63
VAMP4O75379 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VAMP4O75379 RNU6-1013P-201ENST00000384180 107 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 RNU6-432P-201ENST00000384196 109 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 MT-TC-201ENST00000387405 66 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 RN7SKP156-201ENST00000410308 342 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 RNU2-47P-201ENST00000410649 186 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 RN7SKP159-201ENST00000410657 292 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AC068533.1-201ENST00000418542 415 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 RPL7P2-201ENST00000427639 268 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.88□□□□□ -1.63
VAMP4O75379 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.88□□□□□ -1.63
VAMP4O75379 SNRPFP3-201ENST00000457792 225 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AL133162.1-201ENST00000463228 453 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 HMGB1P25-201ENST00000468402 607 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 RN7SL132P-201ENST00000478131 296 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.88□□□□□ -1.63
VAMP4O75379 AC146944.2-203ENST00000502493 354 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.88□□□□□ -1.63
VAMP4O75379 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.88□□□□□ -1.63
VAMP4O75379 AC139495.1-202ENST00000513164 354 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.88□□□□□ -1.63
VAMP4O75379 MTND4P7-201ENST00000523876 130 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 DEFB108D-201ENST00000527787 222 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VAMP4O75379 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VAMP4O75379 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
VAMP4O75379 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.88□□□□□ -1.63
VAMP4O75379 AC020661.2-201ENST00000560114 134 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AC024619.4-201ENST00000580924 316 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.88□□□□□ -1.63
VAMP4O75379 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.88□□□□□ -1.63
VAMP4O75379 AP001836.1-201ENST00000604675 523 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AL137849.1-201ENST00000604767 169 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.88□□□□□ -1.63
VAMP4O75379 AC004825.2-201ENST00000616634 455 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 AC134503.1-201ENST00000633048 54 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 U6.114-201ENST00000636407 96 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAMP4O75379 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAMP4O75379 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.88□□□□□ -1.63
VAMP4O75379 MTND4P14-201ENST00000435799 1354 ntBASIC4.88□□□□□ -1.63
VAMP4O75379 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAMP4O75379 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.88□□□□□ -1.63
VAMP4O75379 AC018555.1-201ENST00000567548 1980 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VAMP4O75379 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAMP4O75379 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAMP4O75379 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VAMP4O75379 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VAMP4O75379 RNA5SP502-201ENST00000362694 119 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 RNU6-637P-201ENST00000384050 107 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 MIR134-201ENST00000385258 73 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 AL109755.1-201ENST00000401791 649 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.87□□□□□ -1.63
VAMP4O75379 AL591419.1-201ENST00000427423 339 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.87□□□□□ -1.63
VAMP4O75379 NIPA2P5-201ENST00000452282 464 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 TRBV12-2-201ENST00000489763 344 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
VAMP4O75379 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.87□□□□□ -1.63
VAMP4O75379 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.87□□□□□ -1.63
VAMP4O75379 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.87□□□□□ -1.63
VAMP4O75379 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.87□□□□□ -1.63
VAMP4O75379 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.87□□□□□ -1.63
VAMP4O75379 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.87□□□□□ -1.63
VAMP4O75379 AC012443.1-201ENST00000605605 231 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.87□□□□□ -1.63
VAMP4O75379 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
VAMP4O75379 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAMP4O75379 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.87□□□□□ -1.63
VAMP4O75379 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAMP4O75379 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.87□□□□□ -1.63
VAMP4O75379 AC244517.1-201ENST00000606030 2086 ntBASIC4.87□□□□□ -1.63
VAMP4O75379 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.87□□□□□ -1.63
VAMP4O75379 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VAMP4O75379 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VAMP4O75379 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VAMP4O75379 AC121333.1-201ENST00000567488 2709 ntBASIC4.86□□□□□ -1.63
VAMP4O75379 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.86□□□□□ -1.63
VAMP4O75379 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VAMP4O75379 RNU6-1284P-201ENST00000363701 100 ntBASIC4.86□□□□□ -1.63
VAMP4O75379 RNU6-82P-201ENST00000363970 107 ntBASIC4.86□□□□□ -1.63
VAMP4O75379 SNORD115-7-201ENST00000365306 82 ntBASIC4.86□□□□□ -1.63
VAMP4O75379 RNU1-64P-201ENST00000365443 163 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms