Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM13O60858 RPL7P37-201ENST00000425095 738 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 UBE2V1P13-201ENST00000436983 439 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 HLA-N-201ENST00000437516 135 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AC005154.2-201ENST00000438110 379 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AP001992.1-205ENST00000462248 379 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM13O60858 CEACAMP10-202ENST00000495431 496 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AC068305.1-201ENST00000497406 726 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AC093853.1-201ENST00000515689 483 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 RNU6-307P-201ENST00000516743 106 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM13O60858 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM13O60858 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM13O60858 AC069240.1-201ENST00000548774 375 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 CYP4A43P-201ENST00000568156 121 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 MIR3133-201ENST00000583157 78 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 MIR5692C1-201ENST00000585309 91 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AC011494.1-201ENST00000596454 237 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AL160290.3-201ENST00000604869 165 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AL596245.1-201ENST00000618994 362 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM13O60858 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM13O60858 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM13O60858 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM13O60858 BDP1P-201ENST00000582658 1990 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 MTND5P6-201ENST00000422338 1798 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM13O60858 LINC01109-201ENST00000603837 3081 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM13O60858 AC074029.4-201ENST00000624796 1859 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM13O60858 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM13O60858 AC021146.4-201ENST00000309229 279 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 Y_RNA.20-201ENST00000362479 113 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 Y_RNA.26-201ENST00000362539 101 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 Y_RNA.29-201ENST00000362570 113 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 Y_RNA.126-201ENST00000363382 111 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 Y_RNA.270-201ENST00000364693 104 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 RNU6-886P-201ENST00000384319 105 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 SNORA24.1-201ENST00000384401 135 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 RNU6-1127P-201ENST00000384580 107 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 SNORA41-201ENST00000384675 132 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AL136372.1-201ENST00000403060 228 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AL445189.1-201ENST00000405722 338 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 RNU6-55P-201ENST00000411092 107 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AP000275.1-201ENST00000411943 390 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 BX682237.1-201ENST00000415016 335 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 ELOCP20-201ENST00000422460 345 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 RPL30P3-201ENST00000424262 333 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM13O60858 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM13O60858 RPL12P11-201ENST00000439970 501 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM13O60858 SCARNA18-201ENST00000459004 134 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 DYNLL1P5-201ENST00000467158 270 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AC104472.2-201ENST00000469035 601 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM13O60858 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM13O60858 AC011005.2-201ENST00000487324 359 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM13O60858 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM13O60858 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM13O60858 MTCO3P44-201ENST00000510977 541 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 IGKV2D-23-201ENST00000518179 286 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AC022790.1-201ENST00000522872 204 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AC090115.3-201ENST00000553218 849 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 EDDM3DP-201ENST00000554692 434 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM13O60858 COX6CP3-201ENST00000580869 223 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM13O60858 MIR6853-201ENST00000619642 74 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM13O60858 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM13O60858 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
TRIM13O60858 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM13O60858 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM13O60858 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM13O60858 AL592182.3-201ENST00000642132 3304 ntBASIC4.39□□□□□ -1.71
TRIM13O60858 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM13O60858 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM13O60858 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRIM13O60858 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM13O60858 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM13O60858 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM13O60858 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TRIM13O60858 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM13O60858 RNU6-1159P-201ENST00000362933 107 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 RNA5SP435-201ENST00000364044 108 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM13O60858 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM13O60858 RN7SKP100-201ENST00000411258 284 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 COX6B1P1-201ENST00000415962 213 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AL139095.3-201ENST00000419672 1203 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC069213.2-201ENST00000420238 366 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM13O60858 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM13O60858 USP9YP30-201ENST00000430729 455 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM13O60858 AL359672.1-201ENST00000442302 409 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms