Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.09□□□□□ -1.59
GRIN3BO60391 RPL21P112-201ENST00000434403 463 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.09□□□□□ -1.59
GRIN3BO60391 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.09□□□□□ -1.59
GRIN3BO60391 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GRIN3BO60391 AC020550.1-201ENST00000447385 163 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AL162389.1-201ENST00000449233 177 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AC107399.1-201ENST00000451226 265 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AC234775.1-201ENST00000454247 670 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AC108078.2-201ENST00000510750 236 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.09□□□□□ -1.59
GRIN3BO60391 RNU6-513P-201ENST00000516104 104 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 Y_RNA.682-201ENST00000516457 100 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 RNU6-1038P-201ENST00000516516 104 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 RNU6-1046P-201ENST00000516538 107 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 RNU6-1088P-201ENST00000516850 104 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 RNU6-685P-201ENST00000517088 95 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.09□□□□□ -1.59
GRIN3BO60391 OR11H5P-201ENST00000554039 926 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AL163153.1-201ENST00000554223 283 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.09□□□□□ -1.59
GRIN3BO60391 AC022655.2-201ENST00000577280 318 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GRIN3BO60391 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.09□□□□□ -1.59
GRIN3BO60391 DPPA3P3-201ENST00000603842 430 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 Z82243.1-201ENST00000609432 473 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 TUG1_2.1-201ENST00000614234 87 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
GRIN3BO60391 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
GRIN3BO60391 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
GRIN3BO60391 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.09□□□□□ -1.59
GRIN3BO60391 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
GRIN3BO60391 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
GRIN3BO60391 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GRIN3BO60391 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.6
GRIN3BO60391 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GRIN3BO60391 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
GRIN3BO60391 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GRIN3BO60391 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 Y_RNA.146-201ENST00000363549 102 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 Y_RNA.202-201ENST00000364083 110 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 RNU6-1318P-201ENST00000365389 103 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 Y_RNA.395-201ENST00000383945 109 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 RNU6-1160P-201ENST00000384546 104 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 RNU6-550P-201ENST00000391057 101 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 EIF4E2P1-201ENST00000393781 255 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 MTCYBP4-201ENST00000401524 249 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 SNORA3.3-201ENST00000408712 125 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 POLHP1-201ENST00000411806 470 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.08□□□□□ -1.6
GRIN3BO60391 AC074085.1-201ENST00000413598 418 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AC092447.6-201ENST00000414578 210 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 UBE2FP1-201ENST00000416536 447 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.08□□□□□ -1.6
GRIN3BO60391 AL391219.1-201ENST00000422570 483 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AC005517.2-201ENST00000424673 553 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.08□□□□□ -1.6
GRIN3BO60391 HMGB3P11-201ENST00000440127 604 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 MTCO3P45-201ENST00000443036 613 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.08□□□□□ -1.6
GRIN3BO60391 FGF7P3-201ENST00000454645 303 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AC004801.2-202ENST00000463559 283 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AL591473.1-201ENST00000464297 313 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 RPL21P8-201ENST00000465083 535 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AC027575.1-201ENST00000481064 460 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AC090096.1-201ENST00000489168 390 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.08□□□□□ -1.6
GRIN3BO60391 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.08□□□□□ -1.6
GRIN3BO60391 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.08□□□□□ -1.6
GRIN3BO60391 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.08□□□□□ -1.6
GRIN3BO60391 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.08□□□□□ -1.6
GRIN3BO60391 CYP2C61P-201ENST00000604072 290 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AL080274.1-201ENST00000605565 220 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AL627309.6-201ENST00000606857 840 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 AC084781.2-201ENST00000615568 161 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 MTND4LP32-201ENST00000636111 270 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GRIN3BO60391 MARK2P15-201ENST00000432204 2186 ntBASIC5.08□□□□□ -1.6
GRIN3BO60391 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GRIN3BO60391 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GRIN3BO60391 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GRIN3BO60391 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
GRIN3BO60391 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GRIN3BO60391 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
GRIN3BO60391 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
GRIN3BO60391 MIR369-201ENST00000362155 70 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 U3.26-201ENST00000391236 204 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 MIR548F5-201ENST00000408421 86 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 MIR1271-201ENST00000408537 86 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 RNU4-14P-201ENST00000410858 122 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 RPL7P10-201ENST00000417407 739 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 USP9YP16-201ENST00000430287 407 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms