Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.23□□□□□ -1.89
SMAD9O15198 MTCO3P5-201ENST00000433620 714 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 SNRPEP4-201ENST00000435815 279 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.23□□□□□ -1.89
SMAD9O15198 AC009237.8-201ENST00000445492 379 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.23□□□□□ -1.89
SMAD9O15198 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.23□□□□□ -1.89
SMAD9O15198 HMGN2P13-201ENST00000476476 274 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 RN7SL432P-201ENST00000484057 298 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL358832.1-201ENST00000497800 389 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMAD9O15198 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.23□□□□□ -1.89
SMAD9O15198 AC104619.4-201ENST00000510773 249 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 RNU6-1220P-201ENST00000517126 108 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 HMGB1P41-201ENST00000520234 440 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 NDUFB9P3-201ENST00000521269 501 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.23□□□□□ -1.89
SMAD9O15198 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.23□□□□□ -1.89
SMAD9O15198 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.23□□□□□ -1.89
SMAD9O15198 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.23□□□□□ -1.89
SMAD9O15198 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
SMAD9O15198 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.23□□□□□ -1.89
SMAD9O15198 AL670379.6-201ENST00000603753 252 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL670379.11-201ENST00000604059 253 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC013553.2-201ENST00000604244 589 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC008162.1-201ENST00000604718 254 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL670379.1-201ENST00000604752 252 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC012468.1-201ENST00000604888 430 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL670379.5-201ENST00000605253 252 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL670379.12-201ENST00000605291 253 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL136363.1-201ENST00000605349 337 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL670379.8-201ENST00000605353 252 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL670379.7-201ENST00000605823 252 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC099778.2-201ENST00000610904 211 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SMAD9O15198 AC099842.1-201ENST00000619919 596 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL589994.2-201ENST00000621124 579 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC244205.2-202ENST00000635781 342 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC058791.1-201ENST00000608412 3198 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC090740.1-201ENST00000623193 2262 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMAD9O15198 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMAD9O15198 AC092447.7-201ENST00000422212 1621 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMAD9O15198 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMAD9O15198 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SMAD9O15198 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMAD9O15198 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMAD9O15198 RNU6-169P-201ENST00000365336 107 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 RNU5E-6P-201ENST00000365574 115 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMAD9O15198 RNU6-39P-201ENST00000384344 107 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 Y_RNA.517-201ENST00000384551 106 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 MIR184-201ENST00000384962 84 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 MIR483-201ENST00000385070 76 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 Y_RNA.582-201ENST00000391023 95 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMAD9O15198 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SMAD9O15198 AL391417.1-201ENST00000404100 426 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 MRPL50P2-201ENST00000416821 482 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC091390.3-201ENST00000426478 338 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 AC133104.1-201ENST00000429100 218 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.22□□□□□ -1.89
SMAD9O15198 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD9O15198 TAAR7P-201ENST00000436141 242 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 RPS3AP12-201ENST00000443616 753 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 AC079448.1-201ENST00000449377 373 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD9O15198 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD9O15198 RPL23AP14-201ENST00000468281 468 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 RPS3AP17-201ENST00000472594 777 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.22□□□□□ -1.89
SMAD9O15198 TTC39CP1-201ENST00000512513 755 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC009063.1-201ENST00000563342 702 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 MTCO3P24-201ENST00000572729 782 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 GLUD1P4-201ENST00000590914 418 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC091953.5-201ENST00000622919 233 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 AL732372.2-225ENST00000642124 456 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SMAD9O15198 AC007656.2-201ENST00000624902 4547 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 CUL1P1-201ENST00000509510 2425 ntBASIC3.22□□□□□ -1.89
SMAD9O15198 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SMAD9O15198 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD9O15198 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.21□□□□□ -1.89
SMAD9O15198 CR848007.1-201ENST00000442354 1699 ntBASIC3.21□□□□□ -1.9
SMAD9O15198 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMAD9O15198 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.21□□□□□ -1.9
SMAD9O15198 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.21□□□□□ -1.9
SMAD9O15198 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms