Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC116337.2-201ENST00000477662 156 ntBASIC3.19□□□□□ -1.9
O00370 AP004217.1-201ENST00000480579 346 ntBASIC3.19□□□□□ -1.9
O00370 AC080014.1-201ENST00000496877 1201 ntBASIC3.19□□□□□ -1.9
O00370 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.19□□□□□ -1.9
O00370 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
O00370 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.19□□□□□ -1.9
O00370 Y_RNA.695-201ENST00000516715 107 ntBASIC3.19□□□□□ -1.9
O00370 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
O00370 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.19□□□□□ -1.9
O00370 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.19□□□□□ -1.9
O00370 AP002748.2-201ENST00000528671 348 ntBASIC3.19□□□□□ -1.9
O00370 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.19□□□□□ -1.9
O00370 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.19□□□□□ -1.9
O00370 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
O00370 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.19□□□□□ -1.9
O00370 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.19□□□□□ -1.9
O00370 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.19□□□□□ -1.9
O00370 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.19□□□□□ -1.9
O00370 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
O00370 AC012119.1-201ENST00000603184 222 ntBASIC3.19□□□□□ -1.9
O00370 NUTF2P8-201ENST00000604593 363 ntBASIC3.19□□□□□ -1.9
O00370 AC005000.2-201ENST00000605468 310 ntBASIC3.19□□□□□ -1.9
O00370 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.19□□□□□ -1.9
O00370 AL450472.3-201ENST00000615578 367 ntBASIC3.19□□□□□ -1.9
O00370 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
O00370 AC048344.4-201ENST00000619744 527 ntBASIC3.19□□□□□ -1.9
O00370 AL159972.1-201ENST00000625150 448 ntBASIC3.19□□□□□ -1.9
O00370 AC025048.6-202ENST00000627667 438 ntBASIC3.19□□□□□ -1.9
O00370 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
O00370 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.19□□□□□ -1.9
O00370 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
O00370 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
O00370 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
O00370 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
O00370 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
O00370 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
O00370 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
O00370 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
O00370 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
O00370 MIR422A-201ENST00000362286 90 ntBASIC3.18□□□□□ -1.9
O00370 RNU4-21P-201ENST00000362802 126 ntBASIC3.18□□□□□ -1.9
O00370 RNU6-799P-201ENST00000363567 107 ntBASIC3.18□□□□□ -1.9
O00370 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
O00370 RNU5E-5P-201ENST00000365379 116 ntBASIC3.18□□□□□ -1.9
O00370 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
O00370 RNU6-432P-201ENST00000384196 109 ntBASIC3.18□□□□□ -1.9
O00370 SNORD116-1-201ENST00000384335 95 ntBASIC3.18□□□□□ -1.9
O00370 RNY3P10-201ENST00000384764 102 ntBASIC3.18□□□□□ -1.9
O00370 RPS20P2-201ENST00000402520 389 ntBASIC3.18□□□□□ -1.9
O00370 RNA5SP274-201ENST00000410484 108 ntBASIC3.18□□□□□ -1.9
O00370 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.18□□□□□ -1.9
O00370 CYCSP46-201ENST00000423569 204 ntBASIC3.18□□□□□ -1.9
O00370 AC092573.2-201ENST00000434546 243 ntBASIC3.18□□□□□ -1.9
O00370 AC009961.3-201ENST00000449832 765 ntBASIC3.18□□□□□ -1.9
O00370 USP9YP12-201ENST00000450481 570 ntBASIC3.18□□□□□ -1.9
O00370 SNRPGP6-201ENST00000451124 220 ntBASIC3.18□□□□□ -1.9
O00370 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.18□□□□□ -1.9
O00370 RPL27AP5-201ENST00000469428 449 ntBASIC3.18□□□□□ -1.9
O00370 RPL31P60-201ENST00000478450 367 ntBASIC3.18□□□□□ -1.9
O00370 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.18□□□□□ -1.9
O00370 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.18□□□□□ -1.9
O00370 AC006445.2-201ENST00000510061 472 ntBASIC3.18□□□□□ -1.9
O00370 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.18□□□□□ -1.9
O00370 RN7SKP282-201ENST00000516824 299 ntBASIC3.18□□□□□ -1.9
O00370 RNU6-840P-201ENST00000517275 65 ntBASIC3.18□□□□□ -1.9
O00370 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.18□□□□□ -1.9
O00370 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.18□□□□□ -1.9
O00370 ZNF519P3-201ENST00000557158 1032 ntBASIC3.18□□□□□ -1.9
O00370 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
O00370 MIR5697-201ENST00000578045 78 ntBASIC3.18□□□□□ -1.9
O00370 MIR4325-201ENST00000583049 90 ntBASIC3.18□□□□□ -1.9
O00370 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
O00370 AC012065.4-201ENST00000602445 679 ntBASIC3.18□□□□□ -1.9
O00370 AC068790.3-201ENST00000602988 553 ntBASIC3.18□□□□□ -1.9
O00370 HSPE1P7-201ENST00000604681 321 ntBASIC3.18□□□□□ -1.9
O00370 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.18□□□□□ -1.9
O00370 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
O00370 Y_RNA.46-201ENST00000362695 102 ntBASIC3.17□□□□□ -1.9
O00370 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
O00370 SNORA48.2-201ENST00000390926 124 ntBASIC3.17□□□□□ -1.9
O00370 MIR887-201ENST00000401258 79 ntBASIC3.17□□□□□ -1.9
O00370 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.17□□□□□ -1.9
O00370 AL356583.2-201ENST00000426536 280 ntBASIC3.17□□□□□ -1.9
O00370 AC244035.1-201ENST00000430042 390 ntBASIC3.17□□□□□ -1.9
O00370 AC109583.1-201ENST00000432156 268 ntBASIC3.17□□□□□ -1.9
O00370 MTCO2P16-201ENST00000436962 677 ntBASIC3.17□□□□□ -1.9
O00370 RPL31P3-201ENST00000458430 332 ntBASIC3.17□□□□□ -1.9
O00370 AL049714.1-201ENST00000466686 347 ntBASIC3.17□□□□□ -1.9
O00370 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.17□□□□□ -1.9
O00370 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
O00370 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.17□□□□□ -1.9
O00370 AL359273.1-201ENST00000510918 627 ntBASIC3.17□□□□□ -1.9
O00370 OR5BM1P-201ENST00000512021 366 ntBASIC3.17□□□□□ -1.9
O00370 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
O00370 RNA5SP341-201ENST00000516261 117 ntBASIC3.17□□□□□ -1.9
O00370 RN7SKP272-201ENST00000516988 232 ntBASIC3.17□□□□□ -1.9
O00370 AC009812.2-201ENST00000517657 457 ntBASIC3.17□□□□□ -1.9
O00370 AP002404.1-201ENST00000532005 451 ntBASIC3.17□□□□□ -1.9
O00370 AP000867.2-201ENST00000532468 320 ntBASIC3.17□□□□□ -1.9
O00370 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms