Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU6-489P-201ENST00000618289 107 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.07□□□□□ -2.08
UPK1AO00322 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.07□□□□□ -2.08
UPK1AO00322 AC093591.3-201ENST00000634516 308 ntBASIC2.07□□□□□ -2.08
UPK1AO00322 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UPK1AO00322 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UPK1AO00322 MTND5P6-201ENST00000422338 1798 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 RNU4-82P-201ENST00000362443 140 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
UPK1AO00322 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
UPK1AO00322 RPL17P50-201ENST00000396131 546 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 BTF3P7-201ENST00000407097 488 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 RNU4-53P-201ENST00000410828 140 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 AC007064.1-201ENST00000412238 351 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.06□□□□□ -2.08
UPK1AO00322 AL358075.3-201ENST00000426289 226 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
UPK1AO00322 AC092427.1-202ENST00000430569 476 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.06□□□□□ -2.08
UPK1AO00322 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK1AO00322 HMGN1P5-201ENST00000448591 263 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 ARPC3P5-201ENST00000448802 534 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK1AO00322 AC069306.1-201ENST00000507006 843 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK1AO00322 AC119751.5-201ENST00000514077 770 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 RN7SKP31-201ENST00000516354 278 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 RNA5SP291-201ENST00000517222 105 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.06□□□□□ -2.08
UPK1AO00322 AL512310.1-201ENST00000548639 172 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
UPK1AO00322 AC068620.3-201ENST00000602749 560 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 AC107294.1-201ENST00000609524 467 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.06□□□□□ -2.08
UPK1AO00322 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.06□□□□□ -2.08
UPK1AO00322 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.06□□□□□ -2.08
UPK1AO00322 AC126544.2-201ENST00000625174 749 ntBASIC2.06□□□□□ -2.08
UPK1AO00322 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.06□□□□□ -2.08
UPK1AO00322 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
UPK1AO00322 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.06□□□□□ -2.08
UPK1AO00322 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
UPK1AO00322 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
UPK1AO00322 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.05□□□□□ -2.08
UPK1AO00322 AL359693.1-201ENST00000614959 2407 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AC022336.2-201ENST00000568966 2538 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 Y_RNA.234-201ENST00000364409 97 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 RNU6-1078P-201ENST00000364522 103 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 snoZ40.1-201ENST00000364540 72 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 RNU6-741P-201ENST00000383889 107 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 TPMTP2-201ENST00000414372 726 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
UPK1AO00322 AL049734.2-201ENST00000441066 616 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 FGF7P5-201ENST00000441829 291 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 MTCYBP3-201ENST00000445588 1137 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 DPPA3P1-201ENST00000448050 469 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AC128713.1-201ENST00000471495 306 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 MRPS36P2-201ENST00000512569 299 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.05□□□□□ -2.08
UPK1AO00322 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.05□□□□□ -2.08
UPK1AO00322 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.05□□□□□ -2.08
UPK1AO00322 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK1AO00322 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.05□□□□□ -2.08
UPK1AO00322 AC093673.2-201ENST00000609674 331 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AC009237.15-201ENST00000610252 501 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AC024257.5-201ENST00000612739 531 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AC231657.1-201ENST00000624313 397 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 IGHVIII-44-202ENST00000636235 289 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 AP003399.1-201ENST00000637534 361 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
UPK1AO00322 CR848007.1-201ENST00000442354 1699 ntBASIC2.05□□□□□ -2.08
UPK1AO00322 MIR449A-201ENST00000362113 91 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 Y_RNA.111-201ENST00000363248 100 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 RNU6-97P-201ENST00000363387 104 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
UPK1AO00322 SET-203ENST00000372688 801 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1AO00322 RNU6-301P-201ENST00000384277 107 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
UPK1AO00322 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.04□□□□□ -2.08
UPK1AO00322 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1AO00322 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1AO00322 AC007919.1-201ENST00000429380 217 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1AO00322 Z82210.1-201ENST00000440037 231 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1AO00322 CBWD4P-201ENST00000445695 655 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AC002381.1-201ENST00000447049 280 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms