Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPS15AP36-201ENST00000492022 382 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM1O00151 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC006445.2-201ENST00000510061 472 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM1O00151 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDLIM1O00151 RPL23AP84-201ENST00000571193 464 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC009163.5-201ENST00000575421 637 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 MIR3609-201ENST00000582661 80 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 UBE2L4-201ENST00000587688 464 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AL139344.1-201ENST00000605228 195 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC091965.4-201ENST00000607691 587 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AL158801.5-201ENST00000623123 465 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AP000676.3-201ENST00000623299 569 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC091965.5-201ENST00000624785 342 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDLIM1O00151 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.77□□□□□ -1.97
PDLIM1O00151 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
PDLIM1O00151 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PDLIM1O00151 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDLIM1O00151 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDLIM1O00151 TPTE2P4-201ENST00000258589 1605 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 RNU1-35P-201ENST00000362782 153 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 RNU6-223P-201ENST00000362830 107 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 SNORD15B-201ENST00000384714 146 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 RPL7P25-201ENST00000404151 721 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 RPS4XP7-201ENST00000406274 780 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 TXNP7-201ENST00000406296 293 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.76□□□□□ -1.97
PDLIM1O00151 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.76□□□□□ -1.97
PDLIM1O00151 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC004263.1-201ENST00000479327 332 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC116347.2-201ENST00000514912 523 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM1O00151 RNA5SP82-201ENST00000516707 92 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 SNORA70.24-201ENST00000517233 118 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AP000867.2-201ENST00000532468 320 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC007954.1-201ENST00000554198 494 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AL355836.1-201ENST00000555951 870 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC034105.3-201ENST00000565294 442 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 ACTR3BP3-201ENST00000565577 979 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AP001004.1-201ENST00000582468 324 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 UBL5P2-201ENST00000583788 219 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AF038458.1-201ENST00000588406 262 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC008751.2-201ENST00000597885 980 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AL353778.1-201ENST00000603149 408 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC015871.2-201ENST00000603605 948 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC112187.2-201ENST00000604345 283 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 BCRP9-201ENST00000605312 388 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM1O00151 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AL138713.1-201ENST00000624026 2130 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 AC092192.1-201ENST00000633154 1018 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.76□□□□□ -1.97
PDLIM1O00151 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 MTND5P33-201ENST00000571250 1450 ntBASIC2.76□□□□□ -1.97
PDLIM1O00151 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDLIM1O00151 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM1O00151 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM1O00151 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM1O00151 CCT4P2-201ENST00000233836 1548 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PDLIM1O00151 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM1O00151 RNU1-39P-201ENST00000383897 165 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 SNORA80E-201ENST00000384744 137 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 MIR491-201ENST00000384877 84 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM1O00151 AL356057.2-201ENST00000403318 432 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 CCNG1P1-201ENST00000406783 885 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 RPL7P8-201ENST00000411964 730 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 RPL23AP39-201ENST00000415533 405 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.75□□□□□ -1.97
PDLIM1O00151 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 RPS15AP7-201ENST00000439294 405 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC009237.8-201ENST00000445492 379 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC016696.1-201ENST00000446949 318 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AL162389.1-201ENST00000449233 177 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms