Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX39AO00148 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX39AO00148 AL358075.3-201ENST00000426289 226 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.02□□□□□ -1.93
DDX39AO00148 GTF2IP20-201ENST00000431663 360 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC109583.1-201ENST00000432156 268 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX39AO00148 RPS15AP27-201ENST00000449183 343 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 RPL23AP35-201ENST00000451906 501 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX39AO00148 RPL21P39-201ENST00000463605 483 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.02□□□□□ -1.93
DDX39AO00148 AC126389.1-201ENST00000477436 290 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 RPL31P41-201ENST00000477967 372 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 RPL21P93-201ENST00000480465 489 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC087190.1-201ENST00000484462 480 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC093591.1-201ENST00000491435 481 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 RPL21P16-201ENST00000495531 483 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.02□□□□□ -1.93
DDX39AO00148 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX39AO00148 RPL23AP94-201ENST00000512518 302 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX39AO00148 RNU6-390P-201ENST00000516259 103 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX39AO00148 MTND1P8-201ENST00000571424 950 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 HMGN2P15-201ENST00000585707 270 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 NRBF2P5-201ENST00000603087 788 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC008277.2-201ENST00000605196 797 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC007349.4-201ENST00000608114 532 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC004908.2-201ENST00000609090 574 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC131902.3-201ENST00000611767 581 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX39AO00148 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.02□□□□□ -1.93
DDX39AO00148 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
DDX39AO00148 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX39AO00148 RNU6-1180P-201ENST00000364935 107 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX39AO00148 RPL7P10-201ENST00000417407 739 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC098614.2-201ENST00000426040 255 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX39AO00148 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX39AO00148 MTND5P4-201ENST00000514978 288 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC022634.1-201ENST00000520765 532 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 UBTFL10-201ENST00000528532 562 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX39AO00148 MIR4635-201ENST00000583759 79 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC136601.2-201ENST00000604356 474 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC009974.1-201ENST00000608881 455 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC072039.2-201ENST00000608883 439 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 FTX_3.1-201ENST00000610451 147 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC008498.1-201ENST00000613012 531 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC004696.1-201ENST00000614345 607 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 Z99129.2-201ENST00000619967 314 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC112204.3-201ENST00000623822 332 ntBASIC3.01□□□□□ -1.93
DDX39AO00148 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX39AO00148 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX39AO00148 RNU6-723P-201ENST00000383973 107 ntBASIC3□□□□□ -1.93
DDX39AO00148 MIR9-1-201ENST00000385198 89 ntBASIC3□□□□□ -1.93
DDX39AO00148 RPS4XP8-201ENST00000402039 771 ntBASIC3□□□□□ -1.93
DDX39AO00148 RPL21P24-201ENST00000413752 448 ntBASIC3□□□□□ -1.93
DDX39AO00148 USP12PX-201ENST00000432383 1057 ntBASIC3□□□□□ -1.93
DDX39AO00148 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3□□□□□ -1.93
DDX39AO00148 SDR42E1P3-201ENST00000438345 502 ntBASIC3□□□□□ -1.93
DDX39AO00148 KRTAP19-11P-201ENST00000439851 104 ntBASIC3□□□□□ -1.93
DDX39AO00148 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3□□□□□ -1.93
DDX39AO00148 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3□□□□□ -1.93
DDX39AO00148 RPL26P9-201ENST00000457466 433 ntBASIC3□□□□□ -1.93
DDX39AO00148 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3□□□□□ -1.93
DDX39AO00148 AL160314.1-201ENST00000490836 438 ntBASIC3□□□□□ -1.93
DDX39AO00148 MRPS36P2-201ENST00000512569 299 ntBASIC3□□□□□ -1.93
DDX39AO00148 SNORA9.3-201ENST00000516383 129 ntBASIC3□□□□□ -1.93
DDX39AO00148 AC105185.1-201ENST00000518705 535 ntBASIC3□□□□□ -1.93
DDX39AO00148 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3□□□□□ -1.93
DDX39AO00148 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3□□□□□ -1.93
DDX39AO00148 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3□□□□□ -1.93
DDX39AO00148 AL133153.1-201ENST00000557756 303 ntBASIC3□□□□□ -1.93
DDX39AO00148 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3□□□□□ -1.93
DDX39AO00148 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3□□□□□ -1.93
DDX39AO00148 MIR3605-201ENST00000583214 100 ntBASIC3□□□□□ -1.93
DDX39AO00148 AC078899.3-201ENST00000599065 212 ntBASIC3□□□□□ -1.93
DDX39AO00148 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3□□□□□ -1.93
DDX39AO00148 AC024560.3-201ENST00000608482 349 ntBASIC3□□□□□ -1.93
DDX39AO00148 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX39AO00148 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
DDX39AO00148 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX39AO00148 CCT4P2-201ENST00000233836 1548 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 MTND5P33-201ENST00000571250 1450 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
DDX39AO00148 MIR627-201ENST00000384979 97 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 MIR181B1-201ENST00000385240 110 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 CCNG1P1-201ENST00000406783 885 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 MIR1305-201ENST00000408300 86 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX39AO00148 RNA5SP492-201ENST00000411330 114 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 PIGPP2-201ENST00000411569 458 ntBASIC2.99□□□□□ -1.93
DDX39AO00148 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX39AO00148 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms