Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIR483-201ENST00000385070 76 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AF228730.1-201ENST00000397972 663 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 FCF1P10-201ENST00000407590 479 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 RNU2-62P-201ENST00000410868 191 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC188H7C350 RPS15AP12-201ENST00000419498 388 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC188H7C350 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AC093392.2-201ENST00000450682 337 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 KATNBL1P6-201ENST00000453433 915 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 RN7SL863P-201ENST00000462370 296 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AP000797.1-201ENST00000478870 387 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 RNA5SP76-201ENST00000516277 87 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC188H7C350 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC188H7C350 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AC011611.1-201ENST00000552179 197 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 DNAJC8P1-201ENST00000554535 372 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC188H7C350 ZNF519P3-201ENST00000557158 1032 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 NUTF2P8-201ENST00000604593 363 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 AL161756.2-201ENST00000604597 246 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC188H7C350 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC188H7C350 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC188H7C350 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC188H7C350 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC188H7C350 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC188H7C350 RNU1-35P-201ENST00000362782 153 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 RNY4P16-201ENST00000364768 94 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 RNY3P13-201ENST00000365542 102 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AL031577.2-201ENST00000404133 280 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AL359634.1-202ENST00000404721 284 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 RPL7P8-201ENST00000411964 730 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AL353777.1-201ENST00000425552 326 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC188H7C350 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC244035.1-201ENST00000430042 390 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC091286.1-201ENST00000431233 461 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC188H7C350 GSTA11P-201ENST00000452866 669 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC091179.1-201ENST00000461606 579 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC233702.1-201ENST00000482905 502 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AL160314.1-201ENST00000490836 438 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC188H7C350 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC188H7C350 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC090888.1-201ENST00000561335 1141 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AL158211.1-201ENST00000566763 763 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC068135.2-201ENST00000569293 1028 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC188H7C350 MIR3146-201ENST00000580367 79 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AL606834.2-201ENST00000602954 668 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 SRGNP1-201ENST00000603392 451 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC092354.1-201ENST00000606057 376 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC090115.4-201ENST00000609970 188 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC004696.1-201ENST00000614345 607 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC188H7C350 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CCDC188H7C350 AC006338.1-201ENST00000618453 749 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 AC068057.2-201ENST00000624047 895 ntBASIC3.1□□□□□ -1.91
CCDC188H7C350 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC188H7C350 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC188H7C350 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC188H7C350 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 RPL9P7-201ENST00000330965 580 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC188H7C350 RNU6-799P-201ENST00000363567 107 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 MIR490-201ENST00000384865 128 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 MRPL42P2-201ENST00000403169 426 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 RNU4-47P-201ENST00000410876 114 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 MTND2P18-201ENST00000419962 1030 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC188H7C350 AC092447.3-201ENST00000426027 686 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms