Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AL161729.4-201ENST00000604650 476 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 U3.45-201ENST00000607547 219 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AL591516.1-201ENST00000611326 274 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 AL157817.1-201ENST00000614264 790 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC013476.2-201ENST00000614456 459 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 SDAD1P2-201ENST00000441308 2028 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 RNU6-1284P-201ENST00000363701 100 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 RNU1-64P-201ENST00000365443 163 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 SNORA20.2-201ENST00000383922 131 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 MIR554-201ENST00000384874 96 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 RNU2-16P-201ENST00000410712 136 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 MTCO3P41-201ENST00000414801 328 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC063979.1-201ENST00000415539 377 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 RBM43P1-201ENST00000476891 1081 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 PHBP14-201ENST00000512887 367 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 SCARNA15.2-201ENST00000516409 127 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 RNU6-1256P-201ENST00000516539 103 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 Vault.3-201ENST00000516676 95 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 AP001804.3-201ENST00000525146 880 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 MIR2682-201ENST00000580305 110 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC006130.2-201ENST00000586202 326 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 NRBF2P1-201ENST00000587407 859 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 AC091805.2-201ENST00000603848 235 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 AL161734.1-201ENST00000609720 557 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 uc_338.25-201ENST00000613756 156 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 XIST_intron.1-201ENST00000619444 68 ntBASIC3.45□□□□□ -1.86
LRRC53A6NM62 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
LRRC53A6NM62 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC53A6NM62 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL161912.2-201ENST00000565707 3007 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC53A6NM62 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC53A6NM62 SNORD56.2-201ENST00000363242 71 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 RNU2-66P-201ENST00000410650 161 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 MTND3P17-201ENST00000416968 344 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 NDUFB4P7-201ENST00000423198 363 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC091390.3-201ENST00000426478 338 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 HMGN2P31-201ENST00000432430 273 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 FCF1P1-201ENST00000432690 571 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC079448.1-201ENST00000449377 373 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 SNRPGP6-201ENST00000451124 220 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC082651.2-201ENST00000496833 166 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AP003392.2-201ENST00000527269 208 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 HIGD1AP1-201ENST00000550979 275 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC073648.5-201ENST00000603502 305 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 MIR8058-201ENST00000615737 89 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AL355365.1-201ENST00000616480 294 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC072046.2-201ENST00000618366 268 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC53A6NM62 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC53A6NM62 AC008568.2-201ENST00000623862 2313 ntBASIC3.44□□□□□ -1.86
LRRC53A6NM62 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms