Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 SDAD1P2-201ENST00000441308 2028 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC009812.4-201ENST00000569134 1805 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AL592437.2-201ENST00000421655 2434 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AC083837.1-201ENST00000565297 2994 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 Y_RNA.489-201ENST00000384410 101 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 SNORA70C-201ENST00000384538 135 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 RNU6-713P-201ENST00000384761 107 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 Y_RNA.577-201ENST00000384794 101 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL030996.1-201ENST00000411430 235 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL513331.1-201ENST00000411908 397 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL353621.1-201ENST00000418219 243 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 UBE2D3P2-201ENST00000424409 445 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL158071.1-201ENST00000430315 461 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL359073.1-201ENST00000448036 403 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 NUTF2P3-201ENST00000448540 384 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 RPL23AP31-201ENST00000456160 467 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AC105758.1-201ENST00000506038 399 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 ACA59.1-201ENST00000515966 143 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 RNY3P15-201ENST00000516297 97 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 RNU6-143P-201ENST00000516942 93 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AP005902.1-201ENST00000521358 186 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AC022882.1-201ENST00000532142 501 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AC107294.1-201ENST00000609524 467 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL445567.2-201ENST00000618935 498 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AL512643.1-201ENST00000635735 524 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.59□□□□□ -1.51
USP17L3A6NCW0 AC100778.3-201ENST00000580060 1750 ntBASIC5.59□□□□□ -1.51
USP17L3A6NCW0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.59□□□□□ -1.52
USP17L3A6NCW0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
USP17L3A6NCW0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
USP17L3A6NCW0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
USP17L3A6NCW0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 RNU6-379P-201ENST00000363813 104 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 SNORD14.1-201ENST00000365609 90 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 SDHCP2-201ENST00000398565 501 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 RNU6-174P-201ENST00000410406 106 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 TMSB10P2-201ENST00000416049 131 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC104333.2-201ENST00000422630 192 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 BX276092.3-201ENST00000424182 230 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AL451062.2-201ENST00000427515 271 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 RPL7P2-201ENST00000427639 268 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 OSTCP8-201ENST00000445117 448 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 HSPE1P6-201ENST00000479457 291 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 CR383656.1-201ENST00000484916 377 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 APOOP4-201ENST00000513530 597 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 RNU4-60P-201ENST00000517239 135 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 CYCSP29-201ENST00000533731 318 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC091979.2-201ENST00000607514 214 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC023043.4-201ENST00000612081 449 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 AC015967.1-201ENST00000619893 476 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 SNORD39.4-201ENST00000620099 78 ntBASIC5.58□□□□□ -1.52
USP17L3A6NCW0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP17L3A6NCW0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC093535.2-201ENST00000624769 2326 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 MAPK10-304ENST00000641341 3984 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 UBE2L2-201ENST00000254302 429 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 RNU5A-1-201ENST00000362698 116 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 Y_RNA.106-201ENST00000363189 100 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 RNA5SP28-201ENST00000363841 119 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 Y_RNA.210-201ENST00000364161 110 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 Y_RNA.307-201ENST00000365022 117 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 RNU6-933P-201ENST00000384424 107 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 RNU6-1179P-201ENST00000384667 107 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 MIR1252-201ENST00000408861 65 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 OR2AH1P-201ENST00000425717 928 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AL592045.1-201ENST00000429867 352 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 HSPD1P21-201ENST00000436541 245 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms