Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 PSMA6P3-201ENST00000428242 164 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AL590383.1-201ENST00000428602 75 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AL121890.1-201ENST00000435457 205 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 GPM6BP3-201ENST00000442797 145 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 RPL38P4-201ENST00000502376 214 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC147055.4-201ENST00000504399 745 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 SUMO2P6-201ENST00000505273 288 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 COX7A2P2-201ENST00000505291 250 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC096571.1-202ENST00000506634 735 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 RNU5F-8P-201ENST00000515941 111 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 BTF3P12-201ENST00000519620 469 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC067805.1-201ENST00000559344 470 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC135628.1-201ENST00000568867 534 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC008749.1-201ENST00000597650 306 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AL031176.1-201ENST00000604554 466 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 KATNBL1P1-201ENST00000605192 748 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 SNORD14A-201ENST00000606526 91 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AL136981.2-201ENST00000617319 734 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AC007785.2-201ENST00000598627 1916 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 DDX10P1-201ENST00000448545 1933 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-220P-201ENST00000390919 107 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 MIR1261-201ENST00000408659 82 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 CR848007.2-201ENST00000424918 787 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 RAC1P8-201ENST00000427086 527 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 UBE2FP3-201ENST00000436366 524 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC003989.2-201ENST00000440224 169 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC114878.1-201ENST00000441166 358 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 RNFT1P2-201ENST00000443064 757 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 TRGVB-201ENST00000453257 471 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 ANKRD26P4-201ENST00000455755 950 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC097493.1-201ENST00000463958 372 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC007182.2-201ENST00000489251 402 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC118282.2-201ENST00000508739 374 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC109471.1-201ENST00000511631 612 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 SCARNA17.1-201ENST00000516211 143 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 SCARNA17.2-201ENST00000516334 143 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC124947.2-202ENST00000552735 133 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 NIFKP8-201ENST00000560500 874 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 TUG1_1.1-201ENST00000610654 145 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 SCARNA17.4-201ENST00000614296 143 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC104307.1-201ENST00000616142 196 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC132825.7-201ENST00000638744 335 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC104454.1-201ENST00000421341 1401 ntBASIC1.49□□□□□ -2.17
TRAV3A0A0B4J244 AC002543.1-201ENST00000299783 1954 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MTND4P27-201ENST00000450813 1354 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC092881.1-201ENST00000638218 2733 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 SNORA16B-201ENST00000364674 135 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MIR514A1-201ENST00000385133 98 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MIR325-201ENST00000385260 98 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AL079342.1-201ENST00000401460 267 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 TMSB4XP8-201ENST00000402089 135 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 SNORD23.1-201ENST00000408212 104 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 TMSB4XP6-201ENST00000415187 135 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 FAM204CP-201ENST00000424489 642 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 TMSB4XP1-201ENST00000424567 135 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC007560.1-201ENST00000426912 237 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 ARF4P4-201ENST00000439608 520 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AL049734.2-201ENST00000441066 616 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AL353691.1-201ENST00000451332 387 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 SUMO2P2-201ENST00000456482 255 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 snoU13.26-201ENST00000459452 105 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC090453.1-201ENST00000495560 436 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms