Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV30A0A087WSZ9 AC010872.1-201ENST00000624225 675 ntBASIC1.23□□□□□ -2.21
TRAV30A0A087WSZ9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV30A0A087WSZ9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AL589880.1-201ENST00000448271 287 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 TRBV1-201ENST00000476502 284 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC022447.1-201ENST00000515358 464 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 RNU6-295P-201ENST00000516901 104 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AP004607.1-201ENST00000524456 203 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC010615.3-201ENST00000597319 394 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AL078605.1-201ENST00000603529 500 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 BX248123.2-201ENST00000606318 124 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC011330.2-201ENST00000621680 635 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 MTND5P10-201ENST00000603719 1809 ntBASIC1.22□□□□□ -2.21
TRAV30A0A087WSZ9 MTND4P23-201ENST00000447723 1363 ntBASIC1.21□□□□□ -2.21
TRAV30A0A087WSZ9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 NUP58P1-201ENST00000502546 1738 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AL356131.1-201ENST00000405826 414 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 RPS3AP44-201ENST00000425466 790 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AL445669.1-201ENST00000426743 755 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 OR10R1P-201ENST00000441524 1141 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC098862.1-201ENST00000504991 413 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC104057.1-201ENST00000515547 497 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 MIR3199-1-201ENST00000582434 88 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC011494.1-201ENST00000596454 237 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC025588.3-201ENST00000604182 274 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC098679.5-201ENST00000624394 571 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 AC026634.1-201ENST00000634369 198 ntBASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
TRAV30A0A087WSZ9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 RNU6-1226P-201ENST00000384317 107 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 SNORA26.9-201ENST00000391322 122 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AL589655.1-201ENST00000405398 482 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 MIR1304-201ENST00000408243 91 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 BOLA3P4-201ENST00000418151 400 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 HMGB1P9-201ENST00000429856 646 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 HMGB3P12-201ENST00000438745 556 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 HMGN1P8-201ENST00000463578 288 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC147055.4-201ENST00000504399 745 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 SUMO2P6-201ENST00000505273 288 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC008526.1-201ENST00000509149 338 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 RNU1-41P-201ENST00000516161 162 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 RNU1-48P-201ENST00000516400 162 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 MIR3126-201ENST00000577443 74 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 SNORD53B-201ENST00000577887 78 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 MIR3683-201ENST00000580847 82 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC012443.1-201ENST00000605605 231 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 MIR6845-201ENST00000613182 61 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 VN1R9P-201ENST00000614184 867 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AC090116.1-201ENST00000615679 446 ntBASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
TRAV30A0A087WSZ9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AC016716.1-201ENST00000265882 708 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 RNU1-62P-201ENST00000362599 164 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 RNU1-72P-201ENST00000362976 153 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 RNU1-42P-201ENST00000364033 160 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AL627390.1-201ENST00000396055 340 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 EDDM3CP-201ENST00000415977 425 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms