Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MCTS2P-201ENST00000394552 546 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AL079342.1-201ENST00000401460 267 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 SNORA11B-201ENST00000408175 129 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 MIR1282-201ENST00000408865 101 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 RNU2-52P-201ENST00000410680 190 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 MRPL35P3-201ENST00000421557 364 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 EIF4EP2-201ENST00000422816 654 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 MED14P1-201ENST00000430517 648 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 TOMM22P2-201ENST00000430735 237 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC241584.1-201ENST00000438469 1241 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 BNIP3P2-201ENST00000441221 577 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 PIGFP3-201ENST00000441918 722 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 HMGN3P1-201ENST00000453847 193 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 MTCO3P11-201ENST00000455103 774 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 MRPS33P3-201ENST00000513456 322 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC023825.1-201ENST00000566704 1030 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AL022067.1-201ENST00000602426 454 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC011374.2-201ENST00000607135 526 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AL121652.1-201ENST00000608851 448 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC103710.1-201ENST00000610003 901 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AL356585.4-201ENST00000623078 1229 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC091953.2-201ENST00000623979 160 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 MIR6830-201ENST00000636015 70 ntBASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LINC01558Q9Y6Z2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 ZNF355P-201ENST00000427301 3216 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 MIR1294-201ENST00000408503 142 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC245028.1-201ENST00000423259 256 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 BX510359.4-201ENST00000423750 193 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC092047.1-201ENST00000424997 240 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 RPP40P1-201ENST00000426762 456 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 HMGN2P3-201ENST00000433603 273 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 HMGN2P5-201ENST00000436882 273 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AL772161.1-201ENST00000439130 476 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 RPL26P6-201ENST00000440913 438 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 RPL26P9-201ENST00000457466 433 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 RNA5SP57-201ENST00000459463 123 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 RN7SL807P-201ENST00000470923 297 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC113420.1-201ENST00000507903 571 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC008549.1-201ENST00000512900 643 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 RNU6-1256P-201ENST00000516539 103 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 CDH12P4-201ENST00000517835 295 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 CDH12P3-201ENST00000517935 295 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 CDH12P1-201ENST00000518435 295 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC124947.2-202ENST00000552735 133 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC106782.4-201ENST00000568264 210 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 MIR4765-201ENST00000585007 77 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC007349.4-201ENST00000608114 532 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AP000238.1-201ENST00000608759 426 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC009233.1-201ENST00000616477 371 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC024581.2-201ENST00000619986 252 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 AC017104.5-201ENST00000637647 639 ntBASIC0.74□□□□□ -2.29
LINC01558Q9Y6Z2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 RNU5A-1-201ENST00000362698 116 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 RNU6-670P-201ENST00000364312 104 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL024474.1-201ENST00000404655 591 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 MIR1178-201ENST00000408396 91 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms