Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 CBX3P1-201ENST00000325243 554 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 Y_RNA.279-201ENST00000364763 95 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AL359837.1-201ENST00000381357 287 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR93-201ENST00000385024 80 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-332P-201ENST00000391193 108 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AL590704.1-201ENST00000402856 794 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 EEF1A1P40-201ENST00000412883 573 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 RAC1P3-201ENST00000416129 580 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 BX842559.1-201ENST00000419615 532 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AP000852.1-201ENST00000472460 573 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AP002812.1-201ENST00000495378 474 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC008958.1-201ENST00000511047 682 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 RN7SKP289-201ENST00000517244 295 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC069240.1-201ENST00000548774 375 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC053481.4-201ENST00000583164 216 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC006130.2-201ENST00000586202 326 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AL035413.2-201ENST00000604801 525 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC009570.1-201ENST00000609599 745 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC093913.1-201ENST00000614178 329 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR6891-201ENST00000618788 93 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC112484.5-201ENST00000624189 228 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AC099654.5-201ENST00000636479 350 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 AL158163.1-201ENST00000603915 1649 ntBASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA9Q9Y5G4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC027290.2-201ENST00000623210 18662 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 MTND4P12-201ENST00000498999 1377 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-510P-201ENST00000391239 108 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 CISD1P1-201ENST00000393907 327 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU2-33P-201ENST00000410344 192 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 Z85995.1-201ENST00000415547 335 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 RPL7P10-201ENST00000417407 739 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 BTF3L4P3-201ENST00000418879 476 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AL160275.3-201ENST00000423876 471 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC007547.1-201ENST00000462177 490 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 RN7SL691P-201ENST00000494487 301 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 RPL30P5-201ENST00000494923 336 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC114786.4-201ENST00000508771 728 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 PPBPP1-201ENST00000510807 373 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-914P-201ENST00000516749 109 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR5692A1-201ENST00000580523 69 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 AC098826.3-201ENST00000603823 466 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 MTND1P37-201ENST00000636562 264 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 FAM35BP-202ENST00000497389 3337 ntBASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms