Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RPL38P4-201ENST00000502376 214 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RNA5SP143-201ENST00000516936 115 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 BTF3P12-201ENST00000519620 469 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 MTCO3P13-201ENST00000577757 781 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AC005498.1-201ENST00000592125 465 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AC025588.3-201ENST00000604182 274 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AC006023.2-201ENST00000609916 167 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 MIR7154-201ENST00000620673 73 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AC112200.1-201ENST00000625015 234 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 MIR1302-1-201ENST00000637932 143 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 OR1S2-201ENST00000302592 978 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 RNU5E-8P-201ENST00000363502 116 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 RNU6-1227P-201ENST00000383981 107 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 RNU6-606P-201ENST00000384721 111 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 RNU2-62P-201ENST00000410868 191 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 USP9YP20-201ENST00000419224 558 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC005534.2-201ENST00000431047 433 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 NANOGP10-201ENST00000453325 895 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 HMGN1P10-201ENST00000474557 553 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AL163973.1-201ENST00000484753 577 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 PPBPP1-201ENST00000510807 373 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC114797.1-201ENST00000514003 728 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 SUB1P1-201ENST00000524415 382 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 PSMA2P1-201ENST00000526365 646 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 OR4P1P-201ENST00000530808 1136 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 RPL21P12-201ENST00000559810 515 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC005668.1-201ENST00000571142 476 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 MTND6P33-201ENST00000571794 183 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AL355375.2-201ENST00000574825 175 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC105224.1-201ENST00000587055 421 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 GLUD1P4-201ENST00000590914 418 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC244505.7-201ENST00000599675 272 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 SNRPGP15-201ENST00000600149 222 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 MIR6075-201ENST00000620782 95 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC039056.2-201ENST00000622261 511 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AC090617.10-201ENST00000624308 134 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 TPTEP1-208ENST00000636884 213 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 AP001148.1-201ENST00000624124 2359 ntBASIC4.53□□□□□ -1.68
CTDP1Q9Y5B0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 FRG1CP-201ENST00000358464 769 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 RNU5A-8P-201ENST00000364102 114 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 RNU6-692P-201ENST00000384496 107 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 SNORD37.1-201ENST00000390968 65 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AL590004.1-201ENST00000405321 300 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 RNU2-15P-201ENST00000410692 191 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AL354751.2-201ENST00000415471 210 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AC017083.1-201ENST00000428093 483 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 RPS20P5-201ENST00000434808 360 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 FTH1P1-201ENST00000437933 532 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AL358232.1-201ENST00000448030 501 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AC233279.1-201ENST00000455300 423 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AL049714.1-201ENST00000466686 347 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AC103851.1-201ENST00000506833 274 ntBASIC4.52□□□□□ -1.69
CTDP1Q9Y5B0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms