Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LARP7P3-201ENST00000579888 337 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 KC877982.1-201ENST00000602313 470 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AC078795.2-201ENST00000602835 1252 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AP001330.4-201ENST00000604350 154 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AC245517.5-201ENST00000611529 162 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AC090970.3-201ENST00000612566 866 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AL589743.7-201ENST00000612637 233 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 MIR6130-201ENST00000619419 109 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AL360181.4-201ENST00000621752 134 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 SCARNA15.3-201ENST00000626315 122 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 SCARNA4.1-201ENST00000628597 123 ntBASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.31□□□□□ -1.88
YIPF1Q9Y548 AC058791.1-201ENST00000608412 3198 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 TAB3P1-202ENST00000452645 1634 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 SNORA51.2-201ENST00000364595 132 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 Y_RNA.517-201ENST00000384551 106 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 RPL30P2-201ENST00000414021 291 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 UBE2FP1-201ENST00000416536 447 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 BX295541.1-201ENST00000417774 250 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 C1DP2-201ENST00000418167 426 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 COTL1P1-201ENST00000422309 375 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC019097.1-201ENST00000424783 735 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 RPL35AP12-201ENST00000425362 338 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC024082.2-201ENST00000434771 238 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC016696.1-201ENST00000446949 318 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC140076.1-201ENST00000449897 361 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC010587.1-201ENST00000505809 469 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC022483.1-201ENST00000514020 567 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 RN7SKP298-201ENST00000515950 94 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 HMGN1P28-201ENST00000521340 364 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 MIR3682-201ENST00000581338 84 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC091805.2-201ENST00000603848 235 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC093732.2-201ENST00000607950 274 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC090425.2-201ENST00000608818 501 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC004908.2-201ENST00000609090 574 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC093838.1-201ENST00000613014 469 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AL590240.3-201ENST00000621416 943 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AL136313.1-201ENST00000624804 202 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 PISRT1-201ENST00000626175 531 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 U6.98-201ENST00000637157 84 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 AC118273.1-201ENST00000525324 3006 ntBASIC3.3□□□□□ -1.88
YIPF1Q9Y548 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
YIPF1Q9Y548 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC009812.4-201ENST00000569134 1805 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RNU5E-1-201ENST00000362477 120 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RNU5A-8P-201ENST00000364102 114 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RNY3P13-201ENST00000365542 102 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RNU6-278P-201ENST00000390945 109 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RPS15AP12-201ENST00000419498 388 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 PPP1R11P2-201ENST00000423543 382 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 USP9YP36-201ENST00000424581 829 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 VDAC1P3-201ENST00000434069 851 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC104850.1-201ENST00000435940 476 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RPL35AP22-201ENST00000436855 335 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC073614.1-201ENST00000438690 650 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 HMGB3P11-201ENST00000440127 604 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 MRPS31P2-201ENST00000451581 518 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RNU7-59P-201ENST00000459101 61 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC114797.1-201ENST00000514003 728 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC009812.2-201ENST00000517657 457 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms