Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC103851.1-201ENST00000506833 274 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 FAM206BP-201ENST00000510179 541 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 GLYCAM1-201ENST00000546596 285 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AC037471.2-201ENST00000564941 598 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 MIR4277-201ENST00000578298 84 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AL356055.1-201ENST00000602528 446 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AC174048.1-201ENST00000603389 144 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AL356218.2-201ENST00000605264 187 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 CTHRC1P1-201ENST00000605383 469 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AL132765.2-201ENST00000610812 351 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AL355810.1-201ENST00000614629 552 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 AP001350.1-201ENST00000601906 1524 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 OR4G2P-202ENST00000641004 1759 ntBASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
R3HCC1Q9Y3T6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RNU1-32P-201ENST00000363937 159 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RNU6-1127P-201ENST00000384580 107 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 MIR659-201ENST00000384963 97 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AL592114.1-201ENST00000403842 483 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 CALM2P2-201ENST00000428512 440 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AL365400.1-201ENST00000431854 640 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 HMGB3P11-201ENST00000440127 604 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RPS15AP27-201ENST00000449183 343 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RPL23AP31-201ENST00000456160 467 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RPL23AP24-201ENST00000458203 385 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RNU6-1208P-201ENST00000459588 107 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RNU6-329P-201ENST00000459618 107 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AP000873.1-201ENST00000463987 400 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RPL21P93-201ENST00000480465 489 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AC078918.1-201ENST00000498515 228 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 FGF7P4-201ENST00000509595 295 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 RNU6-677P-201ENST00000516914 101 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 IGKV2D-23-201ENST00000518179 286 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 MIR5096-201ENST00000583713 70 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 MIR4719-201ENST00000585233 84 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 BNIP3P25-201ENST00000596023 559 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 AC087045.1-201ENST00000605856 382 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 DUSP12P1-201ENST00000612874 516 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 Z82217.1-201ENST00000625157 8149 ntBASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
R3HCC1Q9Y3T6 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 RNA5SP443-201ENST00000363083 132 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 MIR514A1-201ENST00000385133 98 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 MIR3065-201ENST00000390137 79 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 RNA5SP111-201ENST00000411386 101 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 TMSB10P2-201ENST00000416049 131 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 snoU13.4-201ENST00000458916 104 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 RNU7-66P-201ENST00000459469 62 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AC004801.2-202ENST00000463559 283 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AP001086.1-201ENST00000494882 321 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 RNU6-1073P-201ENST00000517182 106 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AC105029.1-201ENST00000520250 669 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 HIGD1AP5-201ENST00000529959 259 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AC022968.1-201ENST00000567372 442 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AC068790.4-201ENST00000602474 263 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AC008745.1-201ENST00000604064 271 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AC022893.3-201ENST00000607665 437 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 AL359547.2-201ENST00000615810 418 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 TPTEP1-208ENST00000636884 213 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 HSPA8P4-201ENST00000511877 1920 ntBASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
R3HCC1Q9Y3T6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
R3HCC1Q9Y3T6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.77□□□□□ -1.65
R3HCC1Q9Y3T6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
R3HCC1Q9Y3T6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.77□□□□□ -1.65
R3HCC1Q9Y3T6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.77□□□□□ -1.65
R3HCC1Q9Y3T6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms