Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC092593.1-201ENST00000515413 1815 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 RNA5SP88-201ENST00000365560 109 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AL122016.1-201ENST00000403365 367 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 RPL17P12-201ENST00000413391 526 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 USP9YP13-201ENST00000417797 480 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC018644.1-201ENST00000429934 551 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 HMGN2P31-201ENST00000432430 273 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 RPS20P5-201ENST00000434808 360 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 LARP1BP3-201ENST00000437229 869 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC005094.1-201ENST00000440420 368 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC009296.1-201ENST00000443146 155 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 MTATP6P30-201ENST00000443540 664 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC126182.1-201ENST00000478134 357 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC055855.1-201ENST00000489563 579 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 GTF2IP9-201ENST00000502460 301 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 LTV1P1-201ENST00000510683 1237 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-390P-201ENST00000516259 103 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 RN7SKP40-201ENST00000517211 242 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC087276.1-201ENST00000529659 480 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC007115.1-201ENST00000546853 234 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC011458.1-201ENST00000604034 617 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC005046.1-201ENST00000608515 625 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 MIR378J-201ENST00000611988 109 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC011890.2-201ENST00000613393 294 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AL139418.1-201ENST00000613613 177 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 AC068724.3-201ENST00000625906 87 ntBASIC2.34□□□□□ -2.03
KCNIP3Q9Y2W7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
KCNIP3Q9Y2W7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC092125.1-201ENST00000562568 1995 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RNU6-884P-201ENST00000363889 107 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 SNORA68.1-201ENST00000364537 132 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 MIR490-201ENST00000384865 128 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AL359634.1-202ENST00000404721 284 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RAB28P1-201ENST00000411517 641 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RPL7P8-201ENST00000411964 730 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC244035.1-201ENST00000430042 390 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 UBE2FP3-201ENST00000436366 524 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RPS15AP7-201ENST00000439294 405 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 ST13P20-201ENST00000447996 1065 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 PDSS1P2-201ENST00000449397 678 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 ANKRD26P4-201ENST00000455755 950 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RPL26P9-201ENST00000457466 433 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC107626.1-201ENST00000471084 183 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC104685.1-201ENST00000502445 371 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC008716.1-201ENST00000511084 513 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RNA5SP290-201ENST00000517133 127 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AP004247.1-201ENST00000531556 1289 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC123904.3-201ENST00000547218 814 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC093012.1-202ENST00000549403 582 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 MYL12BP1-201ENST00000569826 507 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 MIR3160-1-201ENST00000577972 85 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 MIR4443-201ENST00000585052 53 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC006130.2-201ENST00000586202 326 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC060766.3-201ENST00000591442 263 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AL355877.2-201ENST00000603670 358 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 MTND4LP5-201ENST00000605152 292 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC008277.2-201ENST00000605196 797 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 AC024933.1-201ENST00000608472 348 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 BX664608.1-201ENST00000610519 487 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.33□□□□□ -2.04
KCNIP3Q9Y2W7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms