Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 Y_RNA.533-201ENST00000384596 114 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 RNU4-61P-201ENST00000411243 107 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 RPL18P10-201ENST00000425606 538 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 FCF1P4-201ENST00000448326 183 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 RPS23P7-201ENST00000466210 444 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 HSPE1P6-201ENST00000479457 291 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 NDUFB4P9-201ENST00000511646 388 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 MIR892C-201ENST00000516410 77 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 RNA5SP471-201ENST00000516971 106 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 MIR1273C-201ENST00000578669 77 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 MIR4458-201ENST00000578872 75 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 CPDP1-201ENST00000579660 283 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 AL158827.2-201ENST00000602494 330 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 RMST_4.1-201ENST00000616886 107 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 MIR6853-201ENST00000619642 74 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 AL159153.1-201ENST00000619688 317 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 AC138965.3-201ENST00000623875 498 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 AL691447.3-201ENST00000635020 330 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NOD1Q9Y239 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NOD1Q9Y239 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NOD1Q9Y239 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NOD1Q9Y239 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.46□□□□□ -1.53
NOD1Q9Y239 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NOD1Q9Y239 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NOD1Q9Y239 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.46□□□□□ -1.53
NOD1Q9Y239 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NOD1Q9Y239 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NOD1Q9Y239 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NOD1Q9Y239 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 U8.8-201ENST00000365399 135 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 MIR301A-201ENST00000385261 86 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AL591034.2-201ENST00000402839 359 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 RN7SKP106-201ENST00000410832 272 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 COX6CP13-201ENST00000428703 226 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 USP9YP7-201ENST00000436723 430 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC073587.1-201ENST00000447093 876 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 USP9YP32-201ENST00000452432 430 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 RNU6-1037P-201ENST00000459571 107 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC087588.1-201ENST00000462203 316 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 RPL39P38-201ENST00000467018 153 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NOD1Q9Y239 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 TRAV37-201ENST00000553906 342 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 AL049839.1-201ENST00000556151 657 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 PARP1P2-201ENST00000556806 195 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC107294.1-201ENST00000609524 467 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC064801.1-201ENST00000612025 407 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC083809.1-201ENST00000615051 472 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NOD1Q9Y239 AC093535.2-201ENST00000624769 2326 ntBASIC5.46□□□□□ -1.54
NOD1Q9Y239 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NOD1Q9Y239 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 AC008079.2-201ENST00000623543 20396 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 RNU5A-1-201ENST00000362698 116 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 RNU6-1317P-201ENST00000364582 104 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 OR1L6-202ENST00000373684 1044 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 SAR1AP2-201ENST00000392696 594 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 AL035079.1-201ENST00000405210 287 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 AC099670.2-201ENST00000435130 321 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 AC005154.2-201ENST00000438110 379 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 AC009963.2-201ENST00000453431 138 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 AC133134.1-201ENST00000466800 359 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 RPL12P20-201ENST00000475538 479 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 HMGN1P11-201ENST00000508668 303 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 RNU6-897P-201ENST00000517135 105 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 TOMM20P2-201ENST00000540082 421 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms