Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 SNORA57.1-201ENST00000391227 145 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.605-201ENST00000410577 105 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AL645568.3-201ENST00000433683 316 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 NOTCH2P1-201ENST00000443481 624 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 RPS5P7-201ENST00000456664 608 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC096745.1-201ENST00000509945 370 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AP003122.3-201ENST00000526316 255 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 HNRNPCP4-201ENST00000571636 900 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 MIR4458-201ENST00000578872 75 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 MIR4503-201ENST00000582187 83 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC011890.2-201ENST00000613393 294 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 MIR6716-201ENST00000613413 80 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC019206.1-201ENST00000621938 425 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 AC092608.2-201ENST00000624427 218 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 MIR6715B-201ENST00000637172 77 ntBASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDC42EP3Q9UKI2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 EOGT-210ENST00000615922 1931 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC139713.2-214ENST00000642059 1811 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNA5SP28-201ENST00000363841 119 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-266P-201ENST00000364225 107 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-214P-201ENST00000384130 107 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 SNORA70F-201ENST00000384142 135 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-1106P-201ENST00000390845 107 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 U3.35-201ENST00000408405 208 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU4-6P-201ENST00000410804 122 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 ELOCP19-201ENST00000411919 318 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 Z99755.1-201ENST00000414048 380 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 BX842559.1-201ENST00000419615 532 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 MTCYBP9-201ENST00000431021 303 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AL359073.1-201ENST00000448036 403 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 NUTF2P7-201ENST00000453086 375 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AL445433.1-201ENST00000457507 257 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RPL12P20-201ENST00000475538 479 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RN7SL604P-201ENST00000492589 296 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC073073.1-201ENST00000493920 463 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-470P-201ENST00000515954 104 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-927P-201ENST00000516199 100 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-914P-201ENST00000516749 109 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-840P-201ENST00000517275 65 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RPL23AP87-202ENST00000573039 466 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 RN7SL652P-201ENST00000577769 300 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC073539.2-201ENST00000597113 165 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC011626.1-201ENST00000604710 562 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 MIR92B-201ENST00000607575 96 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC034102.8-201ENST00000615146 484 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC087588.2-201ENST00000617667 426 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC015967.1-201ENST00000619893 476 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AC006065.5-201ENST00000623427 349 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AL365440.1-201ENST00000436135 2167 ntBASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP3Q9UKI2 AL391684.1-202ENST00000641293 1636 ntBASIC4.03□□□□□ -1.77
CDC42EP3Q9UKI2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 SDAD1P2-201ENST00000441308 2028 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC063976.2-201ENST00000425667 3556 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms