Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 VN1R108P-201ENST00000431580 830 ntBASIC1.59□□□□□ -2.15
SCN11AQ9UI33 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.59□□□□□ -2.15
SCN11AQ9UI33 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.59□□□□□ -2.15
SCN11AQ9UI33 HSPE1P3-201ENST00000559254 309 ntBASIC1.59□□□□□ -2.15
SCN11AQ9UI33 AC007229.1-201ENST00000590455 412 ntBASIC1.59□□□□□ -2.15
SCN11AQ9UI33 AL138880.2-201ENST00000616214 239 ntBASIC1.59□□□□□ -2.15
SCN11AQ9UI33 AC110079.1-202ENST00000635213 138 ntBASIC1.59□□□□□ -2.15
SCN11AQ9UI33 RNF6P1-201ENST00000444889 1784 ntBASIC1.59□□□□□ -2.15
SCN11AQ9UI33 DNAJC19P6-201ENST00000401853 280 ntBASIC1.59□□□□□ -2.16
SCN11AQ9UI33 AL356379.1-201ENST00000414105 126 ntBASIC1.59□□□□□ -2.16
SCN11AQ9UI33 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.59□□□□□ -2.16
SCN11AQ9UI33 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.59□□□□□ -2.16
SCN11AQ9UI33 RNA5SP233-201ENST00000459153 113 ntBASIC1.59□□□□□ -2.16
SCN11AQ9UI33 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.59□□□□□ -2.16
SCN11AQ9UI33 RNA5SP436-201ENST00000516020 115 ntBASIC1.59□□□□□ -2.16
SCN11AQ9UI33 SNORA31.23-201ENST00000517219 133 ntBASIC1.59□□□□□ -2.16
SCN11AQ9UI33 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.59□□□□□ -2.16
SCN11AQ9UI33 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
SCN11AQ9UI33 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.59□□□□□ -2.16
SCN11AQ9UI33 AC006338.1-201ENST00000618453 749 ntBASIC1.59□□□□□ -2.16
SCN11AQ9UI33 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SCN11AQ9UI33 AL033519.2-201ENST00000403958 392 ntBASIC1.58□□□□□ -2.16
SCN11AQ9UI33 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN11AQ9UI33 AC087879.1-201ENST00000474343 374 ntBASIC1.58□□□□□ -2.16
SCN11AQ9UI33 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.58□□□□□ -2.16
SCN11AQ9UI33 RNU6-405P-201ENST00000516637 110 ntBASIC1.58□□□□□ -2.16
SCN11AQ9UI33 RNU6-467P-201ENST00000517027 110 ntBASIC1.58□□□□□ -2.16
SCN11AQ9UI33 MTND2P17-201ENST00000550281 688 ntBASIC1.58□□□□□ -2.16
SCN11AQ9UI33 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN11AQ9UI33 NUTF2P8-201ENST00000604593 363 ntBASIC1.58□□□□□ -2.16
SCN11AQ9UI33 AC145207.9-201ENST00000623802 325 ntBASIC1.58□□□□□ -2.16
SCN11AQ9UI33 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
SCN11AQ9UI33 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SCN11AQ9UI33 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SCN11AQ9UI33 AC130650.2-201ENST00000618736 2403 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AP002345.1-201ENST00000456493 928 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 FABP5P5-201ENST00000515537 406 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 ERHP1-201ENST00000523006 310 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AC083923.1-201ENST00000523708 376 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AC245036.5-201ENST00000596330 847 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AC106791.2-201ENST00000604680 391 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AC025016.1-201ENST00000616746 682 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AC121333.1-201ENST00000567488 2709 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 ARL5AP3-201ENST00000439327 386 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 RNU6-1073P-201ENST00000517182 106 ntBASIC1.57□□□□□ -2.16
SCN11AQ9UI33 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.57□□□□□ -2.16
SCN11AQ9UI33 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SCN11AQ9UI33 RPS3AP44-201ENST00000425466 790 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AC234781.2-201ENST00000426370 994 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 RABEPKP1-201ENST00000440529 1026 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AL513343.1-201ENST00000451818 792 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AC087343.1-201ENST00000477341 475 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AL135752.1-201ENST00000479477 471 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 HMGB1P38-201ENST00000490557 577 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AC090616.3-201ENST00000582184 217 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AC073413.2-201ENST00000604332 360 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN11AQ9UI33 MTND4P27-201ENST00000450813 1354 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCN11AQ9UI33 AC110792.3-201ENST00000595906 1614 ntBASIC1.56□□□□□ -2.16
SCN11AQ9UI33 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 AL606495.1-201ENST00000422100 813 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 AC005297.2-201ENST00000450430 606 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 AC010285.1-201ENST00000470580 392 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 RPS15AP34-201ENST00000487776 387 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 RN7SKP265-201ENST00000516448 223 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 CIR1P1-201ENST00000524055 1133 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 SETP7-201ENST00000552169 453 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 AL136363.1-201ENST00000605349 337 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 AC020923.1-201ENST00000624021 917 ntBASIC1.55□□□□□ -2.16
SCN11AQ9UI33 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.55□□□□□ -2.16
SCN11AQ9UI33 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
SCN11AQ9UI33 RNU4-91P-201ENST00000364778 135 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 RNU1-133P-201ENST00000364867 167 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 RNU6-629P-201ENST00000384061 103 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 AL445687.1-201ENST00000439946 251 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 MTCO1P48-201ENST00000448024 1096 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 MTCYBP35-201ENST00000503630 1137 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms