Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RPL26P6-201ENST00000440913 438 ntBASIC4.34□□□□□ -1.71
USP25Q9UHP3 RNU7-59P-201ENST00000459101 61 ntBASIC4.34□□□□□ -1.71
USP25Q9UHP3 AC010618.1-201ENST00000469924 477 ntBASIC4.34□□□□□ -1.71
USP25Q9UHP3 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
USP25Q9UHP3 AC008489.1-201ENST00000524271 483 ntBASIC4.34□□□□□ -1.71
USP25Q9UHP3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.34□□□□□ -1.71
USP25Q9UHP3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.34□□□□□ -1.71
USP25Q9UHP3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.34□□□□□ -1.71
USP25Q9UHP3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.34□□□□□ -1.71
USP25Q9UHP3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.34□□□□□ -1.71
USP25Q9UHP3 BDH2P1-201ENST00000602288 736 ntBASIC4.34□□□□□ -1.71
USP25Q9UHP3 MIR6867-201ENST00000610636 67 ntBASIC4.34□□□□□ -1.71
USP25Q9UHP3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP25Q9UHP3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP25Q9UHP3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP25Q9UHP3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP25Q9UHP3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 RNU6-451P-201ENST00000362921 107 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 SNORD56.2-201ENST00000363242 71 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 Y_RNA.263-201ENST00000364659 114 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 RNA5SP97-201ENST00000365006 84 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 RNU6-169P-201ENST00000365336 107 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 RNU6-278P-201ENST00000390945 109 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 RPS26P8-201ENST00000393490 348 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC004975.1-201ENST00000428733 208 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 SEPT14P3-201ENST00000439401 183 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AL732372.2-207ENST00000445840 183 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 SNRPGP6-201ENST00000451124 220 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 SEPT14P2-201ENST00000453405 183 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC108059.3-201ENST00000456388 214 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 HMGN2P16-201ENST00000456802 261 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC004801.2-202ENST00000463559 283 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 MTCO2P30-201ENST00000503662 364 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC114786.4-201ENST00000508771 728 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 MTND3P22-201ENST00000510932 243 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 SEPT14P4-201ENST00000513445 186 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 SNORA31.9-201ENST00000516429 84 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 RNA5SP164-201ENST00000516533 110 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 ERHP1-201ENST00000523006 310 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 FO082796.1-201ENST00000523795 183 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC022616.3-201ENST00000523940 148 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 CENPUP1-201ENST00000526649 1202 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 AL133153.1-201ENST00000557756 303 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 ZNF192P1-203ENST00000565888 810 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 MIR4738-201ENST00000579134 87 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC087045.1-201ENST00000605856 382 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 AP002826.1-201ENST00000608835 315 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AL603758.1-201ENST00000618654 241 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC006504.8-201ENST00000621046 635 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AC112484.5-201ENST00000624189 228 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 AL359697.1-201ENST00000624879 587 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP25Q9UHP3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.33□□□□□ -1.72
USP25Q9UHP3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP25Q9UHP3 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.33□□□□□ -1.72
USP25Q9UHP3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP25Q9UHP3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP25Q9UHP3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU6-1097P-201ENST00000363586 107 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU5A-8P-201ENST00000364102 114 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU6-283P-201ENST00000364788 107 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU6-456P-201ENST00000384493 107 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RPL7P60-201ENST00000397636 735 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AL109755.1-201ENST00000401791 649 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU4-6P-201ENST00000410804 122 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AL513185.2-201ENST00000425543 193 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 GTF2IP20-201ENST00000431663 360 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC119618.1-201ENST00000434191 222 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 PMCHL2-203ENST00000457791 237 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC022364.2-201ENST00000457963 554 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU7-170P-201ENST00000459303 61 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU6-261P-201ENST00000459506 102 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 SNRPGP3-201ENST00000469405 227 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 RPL39P36-201ENST00000490784 156 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 PCBP2P3-201ENST00000509726 843 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNA5SP208-201ENST00000516156 78 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RN7SKP21-201ENST00000516503 220 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 RNU6-835P-201ENST00000516974 104 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms