Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RN7SKP223-201ENST00000410582 62 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 ATG3P1-201ENST00000419507 911 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AL953862.1-201ENST00000423016 168 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 RPL27AP8-201ENST00000424277 446 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC079780.1-201ENST00000428259 207 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC009961.3-201ENST00000449832 765 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 snoU13.23-201ENST00000458863 104 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 RNA5SP310-201ENST00000459084 116 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 RPL7P18-201ENST00000478965 734 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC010587.2-201ENST00000511727 448 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 RNA5SP216-201ENST00000516111 123 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 RNU6-311P-201ENST00000516224 102 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 BBIP1P1-201ENST00000602999 279 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC011451.2-201ENST00000604303 598 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC106900.2-201ENST00000604994 317 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AL445264.1-201ENST00000621719 171 ntBASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.15□□□□□ -1.9
NPC1L1Q9UHC9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPC1L1Q9UHC9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
NPC1L1Q9UHC9 AC090740.1-201ENST00000623193 2262 ntBASIC3.15□□□□□ -1.91
NPC1L1Q9UHC9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.15□□□□□ -1.91
NPC1L1Q9UHC9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AL161781.1-201ENST00000354277 403 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 RNU6-882P-201ENST00000391025 103 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 RNA5SP425-201ENST00000410336 112 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 USP9YP33-201ENST00000412220 421 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 HMGB1P49-201ENST00000418882 569 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC233728.2-201ENST00000425348 757 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 USP9YP35-201ENST00000435696 412 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC234775.1-201ENST00000454247 670 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 RPS20P22-201ENST00000473700 357 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC104563.1-201ENST00000476147 376 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC112673.1-201ENST00000513168 575 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 MTND4P33-201ENST00000556706 766 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 CYCSP2-201ENST00000558168 301 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 MIR4648-201ENST00000580107 72 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AL356575.1-201ENST00000603008 283 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AL592221.1-201ENST00000605266 382 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AP002826.1-201ENST00000608835 315 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 AC006927.4-201ENST00000639187 543 ntBASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPC1L1Q9UHC9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 MIR764-201ENST00000390811 85 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 RPL23AP29-201ENST00000397284 453 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 RNU2-43P-201ENST00000410306 190 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 MTCYBP38-201ENST00000417160 1123 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 ELOCP9-201ENST00000418624 239 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AL139415.2-201ENST00000431968 163 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC109583.1-201ENST00000432156 268 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 COX7BP2-201ENST00000437976 242 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC022483.1-201ENST00000514020 567 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC078814.3-201ENST00000553036 491 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 MED28P6-201ENST00000558776 231 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC105137.2-201ENST00000569073 466 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 VN1R82P-201ENST00000601481 356 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC013470.4-201ENST00000619978 986 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AC011330.2-201ENST00000621680 635 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AP002782.1-201ENST00000623107 614 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 MTCO1P9-201ENST00000505577 1534 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms