Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 AC004987.4-201ENST00000603383 338 ntBASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 AP002826.1-201ENST00000608835 315 ntBASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 AL445264.1-201ENST00000621719 171 ntBASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 MIR3974-201ENST00000637126 96 ntBASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 Z82195.2-201ENST00000612348 18351 ntBASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.17□□□□□ -1.9
CLIP2Q9UDT6 ZNF876P-202ENST00000398732 1485 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 FRG1BP-201ENST00000278882 761 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 RNU6-28P-201ENST00000362378 107 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 RNU6-859P-201ENST00000362728 107 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 BX682237.1-201ENST00000415016 335 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC010153.1-201ENST00000432862 727 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 ZNF886P-201ENST00000450781 723 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AL359385.1-201ENST00000456509 365 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 RNU7-136P-201ENST00000458819 69 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC126389.1-201ENST00000477436 290 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 MTND4P2-201ENST00000507767 1203 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 Y_RNA.655-201ENST00000515919 96 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 OR4K8P-201ENST00000578842 1048 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AP001269.3-201ENST00000588718 329 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 GLUD1P4-201ENST00000590914 418 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 RPL23AP78-201ENST00000599928 470 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 NUTF2P8-201ENST00000604593 363 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC008277.2-201ENST00000605196 797 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC026585.1-201ENST00000619582 524 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 AC079416.3-201ENST00000624479 549 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.16□□□□□ -1.9
CLIP2Q9UDT6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLIP2Q9UDT6 AC006378.2-201ENST00000623178 2476 ntBASIC3.15□□□□□ -1.9
CLIP2Q9UDT6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CLIP2Q9UDT6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 DEFB108F-201ENST00000344638 222 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 RNU6-1214P-201ENST00000363650 109 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 Y_RNA.311-201ENST00000365068 96 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 Y_RNA.436-201ENST00000384097 102 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AL049545.1-201ENST00000401856 572 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 CCDC58P2-201ENST00000417131 366 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 USP9YP26-201ENST00000421008 661 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 USP9YP14-201ENST00000430663 563 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC024082.2-201ENST00000434771 238 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 USP9YP25-201ENST00000457708 443 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 SEM1P1-201ENST00000506694 209 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC109445.1-201ENST00000512356 383 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC093677.1-201ENST00000514414 678 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 DEFB131D-201ENST00000526803 184 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 DEFB108D-201ENST00000527787 222 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC023813.2-201ENST00000564321 469 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AL512347.1-201ENST00000566420 503 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 MIR3921-201ENST00000577308 85 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 Z99497.2-201ENST00000603634 310 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC025588.2-201ENST00000604851 466 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AL133507.1-201ENST00000605269 557 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC107075.1-201ENST00000613695 314 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 AC092140.2-201ENST00000618027 521 ntBASIC3.15□□□□□ -1.91
CLIP2Q9UDT6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms