Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC087369.1-201ENST00000520775 996 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 AC093227.2-201ENST00000589357 285 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 BDH2P1-201ENST00000602288 736 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 RNU6-85P-201ENST00000605989 107 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNTN3Q9P232 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTN3Q9P232 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTN3Q9P232 PRO1804-201ENST00000623780 2050 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNTN3Q9P232 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTN3Q9P232 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC025031.4-201ENST00000621248 3271 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 RNA5SP443-201ENST00000363083 132 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 Y_RNA.276-201ENST00000364732 109 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 Y_RNA.512-201ENST00000384518 102 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 RNU2-3P-201ENST00000410144 191 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC119751.6-201ENST00000416712 186 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 PGBD4P6-201ENST00000421501 610 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 AL133396.1-201ENST00000432048 687 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 RPS11P1-201ENST00000451072 473 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 RPL23AP31-201ENST00000456160 467 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 RN7SL738P-201ENST00000470264 297 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC018437.1-201ENST00000492214 406 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 Y_RNA.715-201ENST00000517082 110 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC008694.2-201ENST00000517591 306 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC009643.1-201ENST00000532030 391 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC005344.1-201ENST00000613391 459 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 AL031601.2-202ENST00000622650 282 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 AP000346.3-201ENST00000622821 210 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 MIR4272-201ENST00000635924 64 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CNTN3Q9P232 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC005005.4-201ENST00000623789 16698 ntBASIC5.14□□□□□ -1.59
CNTN3Q9P232 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTN3Q9P232 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNTN3Q9P232 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTN3Q9P232 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.13□□□□□ -1.59
CNTN3Q9P232 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CNTN3Q9P232 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTN3Q9P232 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTN3Q9P232 RNU6-1303P-201ENST00000364841 107 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 Y_RNA.396-201ENST00000383949 103 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 SNORA70F-201ENST00000384142 135 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 Y_RNA.526-201ENST00000384572 110 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 RNU1-82P-201ENST00000390851 165 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 AL590762.2-201ENST00000395798 571 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 RNU6-174P-201ENST00000410406 106 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 RN7SKP216-201ENST00000411050 312 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 AC108032.1-201ENST00000416706 207 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 RPS15AP6-201ENST00000420703 385 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTN3Q9P232 AC079168.2-201ENST00000453977 416 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.13□□□□□ -1.59
CNTN3Q9P232 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.13□□□□□ -1.59
CNTN3Q9P232 RN7SL52P-201ENST00000584271 284 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 OR1M4P-201ENST00000589199 287 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 RN7SL722P-201ENST00000617780 284 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 RN7SL565P-201ENST00000618246 284 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 U6.104-201ENST00000637979 90 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.13□□□□□ -1.59
CNTN3Q9P232 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTN3Q9P232 AC008669.1-201ENST00000565823 2178 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 AP001273.1-201ENST00000624493 3152 ntBASIC5.13□□□□□ -1.59
CNTN3Q9P232 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTN3Q9P232 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTN3Q9P232 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CNTN3Q9P232 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTN3Q9P232 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTN3Q9P232 MTND5P27-201ENST00000428871 1720 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 U3.15-201ENST00000365398 212 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 RPL21P1-201ENST00000399532 476 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 AL138885.1-201ENST00000405921 675 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 U3.35-201ENST00000408405 208 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 RN7SKP106-201ENST00000410832 272 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 SSXP9-201ENST00000417503 292 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 HMGB1P9-201ENST00000429856 646 ntBASIC5.12□□□□□ -1.59
CNTN3Q9P232 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.12□□□□□ -1.59
CNTN3Q9P232 CEACAMP4-201ENST00000457676 421 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms