Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC010733.2-201ENST00000589496 5702 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 MAPK10-372ENST00000641954 3413 ntBASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HCN3Q9P1Z3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
HCN3Q9P1Z3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC073343.1-201ENST00000328239 651 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 SNORD6-201ENST00000365444 73 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 SNORA70.4-201ENST00000365509 134 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 GSTA9P-201ENST00000406231 611 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 SNORA11.1-201ENST00000408133 129 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 RPL23AP30-201ENST00000432419 501 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 GPR143P-201ENST00000434155 205 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 TAAR7P-201ENST00000436141 242 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AL358232.1-201ENST00000448030 501 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 RPL37P6-201ENST00000460682 294 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 RN7SKP18-201ENST00000516005 275 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 RN7SKP209-201ENST00000516888 304 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 RANP9-201ENST00000519957 271 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AP006587.4-201ENST00000526053 529 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 CASP1P1-201ENST00000526345 212 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC007619.2-201ENST00000605743 379 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AL592295.2-201ENST00000612578 206 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC002076.2-201ENST00000617362 122 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC098679.4-201ENST00000624241 654 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 OR5AK4P-201ENST00000635912 903 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AP001148.1-201ENST00000624124 2359 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 MTND5P26-201ENST00000426018 1752 ntBASIC3.46□□□□□ -1.86
HCN3Q9P1Z3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 RNA5SP295-201ENST00000362655 121 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 MIR558-201ENST00000384920 94 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 RNU2-39P-201ENST00000410604 198 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC069157.1-201ENST00000421749 137 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC017083.1-201ENST00000428093 483 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 SNRPEP4-201ENST00000435815 279 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AL451074.3-201ENST00000437709 472 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 MTND4P25-201ENST00000441039 533 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 PIGFP3-201ENST00000441918 722 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC013267.1-201ENST00000458227 267 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 RPL23AP14-201ENST00000468281 468 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC011825.1-201ENST00000484967 388 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC023194.1-201ENST00000493084 308 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 MTND2P33-201ENST00000506452 1031 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 RNA5SP291-201ENST00000517222 105 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC090572.1-201ENST00000519251 160 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 SUB1P2-201ENST00000556401 297 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC012557.2-201ENST00000605919 418 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 RNVU1-4-201ENST00000612985 164 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 AC068831.7-201ENST00000616954 363 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 MIR6075-201ENST00000620782 95 ntBASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN3Q9P1Z3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RNU6-288P-201ENST00000363690 104 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RNU6-960P-201ENST00000364056 120 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RN7SKP226-201ENST00000364912 300 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 SMIM11P1-201ENST00000369586 178 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms