Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 BX664608.1-201ENST00000610519 487 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 MTND1P37-201ENST00000636562 264 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC013437.2-201ENST00000639587 677 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 DDX43P2-201ENST00000604753 1354 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC062016.1-201ENST00000355719 319 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 RNU1-39P-201ENST00000383897 165 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 RNU6-413P-201ENST00000384115 107 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 RN7SKP140-201ENST00000411196 284 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 ZNF863P-201ENST00000426746 417 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 NANOGP2-201ENST00000435391 727 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 RPL36AP6-201ENST00000435770 321 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 UBE2V1P13-201ENST00000436983 439 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AL358794.1-201ENST00000445689 381 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC007327.1-201ENST00000447461 264 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC009961.3-201ENST00000449832 765 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 RNU7-26P-201ENST00000458980 63 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC096571.1-202ENST00000506634 735 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC114786.4-201ENST00000508771 728 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC118465.1-201ENST00000513820 1271 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC114797.1-201ENST00000514003 728 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC112206.4-201ENST00000515142 405 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 RNU1-104P-201ENST00000517280 175 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC021451.1-201ENST00000523498 1129 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC079600.2-201ENST00000550076 130 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC025281.1-201ENST00000567026 265 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 OR10AB1P-201ENST00000609613 938 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AL138960.2-201ENST00000625145 535 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC019226.1-201ENST00000625666 515 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC092447.10-201ENST00000620607 1652 ntBASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.49□□□□□ -2.01
KLHL28Q9NXS3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 CCT4P2-201ENST00000233836 1548 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 RNU5E-10P-201ENST00000363506 118 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 Y_RNA.311-201ENST00000365068 96 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AL138827.1-201ENST00000402666 306 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 MIR1284-201ENST00000408337 120 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 RNU6-516P-201ENST00000411381 104 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC007064.1-201ENST00000412238 351 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC007919.1-201ENST00000429380 217 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 ZYG11AP1-201ENST00000430329 837 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 COX7BP2-201ENST00000437976 242 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 ST13P20-201ENST00000447996 1065 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 MTND1P16-201ENST00000465177 898 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 RN7SL432P-201ENST00000484057 298 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 HMGB1P36-201ENST00000487709 576 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC024589.1-201ENST00000512207 263 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 MIR3162-201ENST00000581818 82 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 HMGN2P15-201ENST00000585707 270 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 AL139344.1-201ENST00000605228 195 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 FO624990.1-201ENST00000636373 85 ntBASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.48□□□□□ -2.01
KLHL28Q9NXS3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.47□□□□□ -2.01
KLHL28Q9NXS3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms