Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 AC012616.1-201ENST00000600294 197 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 AC011921.3-201ENST00000605540 361 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 MIR6820-201ENST00000611508 62 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 AL023881.1-201ENST00000621088 301 ntBASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CUEDC1Q9NWM3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CUEDC1Q9NWM3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
CUEDC1Q9NWM3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CUEDC1Q9NWM3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AC004925.1-201ENST00000624256 2706 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 RNU4-90P-201ENST00000362773 141 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.435-201ENST00000384095 112 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.602-201ENST00000410535 92 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-1135P-201ENST00000411083 103 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 RPL21P90-201ENST00000415692 466 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 EI24P1-201ENST00000416584 867 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AC099677.1-201ENST00000420575 175 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 RAB9BP1-201ENST00000519581 626 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AP006245.1-201ENST00000522549 120 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 LRRC37A5P-203ENST00000580181 585 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 SNRPGP15-201ENST00000600149 222 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AC008725.1-201ENST00000605123 2263 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 AL365440.1-201ENST00000436135 2167 ntBASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.33□□□□□ -1.56
CUEDC1Q9NWM3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AL034549.2-201ENST00000618285 3373 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-1155P-201ENST00000363554 107 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-335P-201ENST00000364563 113 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-1074P-201ENST00000383995 104 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.441-201ENST00000384123 112 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-1181P-201ENST00000384191 106 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 SNORD20-201ENST00000384550 80 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 MIR550A3-201ENST00000390735 95 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-817P-201ENST00000391083 104 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-918P-201ENST00000391219 106 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RPL21P75-201ENST00000396599 483 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RPL21P28-201ENST00000401418 483 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RPL21P67-201ENST00000402896 478 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 U3.35-201ENST00000408405 208 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNA5SP494-201ENST00000410653 129 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-607P-201ENST00000411283 108 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AL590556.1-201ENST00000423231 483 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC099670.2-201ENST00000435130 321 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RPL12P3-201ENST00000440080 396 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 LINC02210-201ENST00000444561 288 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AZGP1P2-201ENST00000454506 345 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-1037P-201ENST00000459571 107 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RN7SL172P-201ENST00000460535 303 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC108161.1-201ENST00000461060 402 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RPL21P11-201ENST00000461458 483 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RPL21P39-201ENST00000463605 483 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC132942.1-201ENST00000486753 483 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC093591.1-201ENST00000491435 481 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 RPL21P16-201ENST00000495531 483 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AP005403.1-201ENST00000579720 229 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC005255.1-201ENST00000593748 216 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AL049539.1-201ENST00000611964 459 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC034102.8-201ENST00000615146 484 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 AC132068.1-201ENST00000623805 459 ntBASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CUEDC1Q9NWM3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AL360270.2-201ENST00000562952 5985 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms