Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC128657.1-201ENST00000549459 145 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 MIR5583-1-201ENST00000580941 59 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC105224.1-201ENST00000587055 421 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 BNIP3P16-201ENST00000589779 534 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC006157.1-201ENST00000611750 366 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 AL732372.2-225ENST00000642124 456 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG3Q9NT62 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG3Q9NT62 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG3Q9NT62 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC107081.3-201ENST00000612715 2034 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG3Q9NT62 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG3Q9NT62 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC116667.1-201ENST00000604855 2072 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG3Q9NT62 RNU6-213P-201ENST00000384051 104 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 Y_RNA.482-201ENST00000384377 111 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 Y_RNA.496-201ENST00000384444 101 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 RNU1-44P-201ENST00000384453 163 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 Y_RNA.556-201ENST00000384677 113 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 SOD2P1-201ENST00000396543 562 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG3Q9NT62 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 RAB9AP3-201ENST00000412737 573 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 DPH3P2-201ENST00000422618 250 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 TBCAP1-201ENST00000436520 327 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC073587.1-201ENST00000447093 876 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 RAB9AP1-201ENST00000449393 573 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 RPL5P30-201ENST00000465511 891 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC126389.1-201ENST00000477436 290 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 AP003497.1-201ENST00000528472 562 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AP000907.2-201ENST00000530827 353 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 MIR4775-201ENST00000581168 75 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 Z82243.1-201ENST00000609432 473 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC137590.2-201ENST00000619709 240 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 AC106871.1-201ENST00000568324 3102 ntBASIC5.37□□□□□ -1.55
ATG3Q9NT62 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
ATG3Q9NT62 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG3Q9NT62 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG3Q9NT62 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG3Q9NT62 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 SNORA62.1-201ENST00000364287 154 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 Y_RNA.252-201ENST00000364556 101 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 RNU6-890P-201ENST00000384121 107 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 Y_RNA.447-201ENST00000384184 113 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 MIR200C-201ENST00000384980 68 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 UBE2V1P2-201ENST00000397758 440 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 AC093578.1-201ENST00000415219 368 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 RPL23AP46-201ENST00000438548 490 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 AF228730.2-201ENST00000438784 848 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 GSTA11P-201ENST00000452866 669 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 RPL23AP11-201ENST00000475260 469 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 AC055855.1-201ENST00000489563 579 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 AC015911.1-201ENST00000495111 156 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 Y_RNA.661-201ENST00000516003 99 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 Y_RNA.680-201ENST00000516441 93 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 AC022790.1-201ENST00000522872 204 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG3Q9NT62 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 AL354798.1-201ENST00000622505 329 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 AL669831.3-213ENST00000636676 183 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 DDX18P3-201ENST00000404856 2007 ntBASIC5.36□□□□□ -1.55
ATG3Q9NT62 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG3Q9NT62 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
ATG3Q9NT62 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG3Q9NT62 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG3Q9NT62 RNU6-99P-201ENST00000364721 107 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 Y_RNA.489-201ENST00000384410 101 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 RNU6-601P-201ENST00000384540 107 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 MIR449B-201ENST00000384995 97 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 RNU6-1109P-201ENST00000391187 107 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms