Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC025588.2-201ENST00000604851 466 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC099785.1-201ENST00000605697 437 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC007349.4-201ENST00000608114 532 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AL357080.1-201ENST00000617394 239 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AL160394.1-201ENST00000624765 724 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 MIR1291-201ENST00000627649 87 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
VCX3AQ9NNX9 AC010889.1-201ENST00000566193 2666 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 SNORA38.1-201ENST00000364172 131 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 OR5H15-201ENST00000383696 930 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 TPMTP3-201ENST00000411928 735 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 CYCSP48-201ENST00000417124 323 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC236972.1-201ENST00000433225 199 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 RPL18AP17-201ENST00000455326 198 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 RPS27AP10-201ENST00000496103 208 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC010374.2-201ENST00000512933 535 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 MTCO3P27-201ENST00000514397 196 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC023632.4-201ENST00000517783 191 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC104072.1-201ENST00000568817 668 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AL139344.1-201ENST00000605228 195 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC069545.1-201ENST00000605671 358 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AL138478.1-201ENST00000612252 832 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AC010133.1-201ENST00000615809 842 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3AQ9NNX9 ZNF833P-201ENST00000424938 1494 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC073346.2-201ENST00000624724 2058 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 RNU6-1122P-201ENST00000384449 107 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 MIR200C-201ENST00000384980 68 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AL445529.1-201ENST00000398713 389 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC007560.1-201ENST00000426912 237 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 SDR42E1P3-201ENST00000438345 502 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC017099.1-201ENST00000448261 1028 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 RN7SKP24-201ENST00000515888 284 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AP005902.1-201ENST00000521358 186 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC084757.4-201ENST00000616350 526 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 AC068724.3-201ENST00000625906 87 ntBASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3AQ9NNX9 RNU6-859P-201ENST00000362728 107 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 RNA5SP125-201ENST00000364843 120 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 RNU6-359P-201ENST00000365466 108 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 RNU6-1207P-201ENST00000384343 107 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 USP9YP19-201ENST00000412165 485 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC096649.2-201ENST00000416186 393 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 USP9YP13-201ENST00000417797 480 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC007435.1-201ENST00000421086 415 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 SKA2P1-201ENST00000425592 390 ntBASIC2.06□□□□□ -2.08
VCX3AQ9NNX9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms