Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL732372.2-225ENST00000642124 456 ntBASIC3.1□□□□□ -1.91
CHMP1AQ9HD42 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.1□□□□□ -1.91
CHMP1AQ9HD42 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHMP1AQ9HD42 MAPK10-322ENST00000641485 4530 ntBASIC3.1□□□□□ -1.91
CHMP1AQ9HD42 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 API5P2-201ENST00000397055 1498 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 GABRG2-229ENST00000641017 3628 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RNU6-946P-201ENST00000383878 107 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RNA5SP252-201ENST00000391131 119 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 SNORA3.3-201ENST00000408712 125 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RNU2-66P-201ENST00000410650 161 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RNU6-628P-201ENST00000410675 107 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RNU2-16P-201ENST00000410712 136 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC114491.1-201ENST00000416095 246 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 MRPL50P2-201ENST00000416821 482 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 MED13P1-201ENST00000428342 171 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RPS24P13-201ENST00000442520 397 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC010099.1-201ENST00000455434 375 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC006483.1-201ENST00000487308 313 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC007182.2-201ENST00000489251 402 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AL160314.1-201ENST00000490836 438 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 FCF1P3-201ENST00000496394 590 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 SNORA31.1-201ENST00000515993 133 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 SNORA31.5-201ENST00000516190 133 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RNA5SP380-201ENST00000517190 98 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 RANP9-201ENST00000519957 271 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 ATP5F1P5-201ENST00000526403 760 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AP003072.2-201ENST00000527756 676 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 HIGD1AP1-201ENST00000550979 275 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC009063.1-201ENST00000563342 702 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC034105.3-201ENST00000565294 442 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC006504.3-201ENST00000586818 523 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC091805.2-201ENST00000603848 235 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AL161798.1-201ENST00000604630 131 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 NDUFA8P1-201ENST00000605525 367 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AL121992.2-201ENST00000606262 256 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AL365204.3-201ENST00000612448 685 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AL138880.2-201ENST00000616214 239 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC006111.3-201ENST00000622137 383 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC007998.5-201ENST00000622938 237 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AC004777.1-201ENST00000624317 287 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 MIR6830-201ENST00000636015 70 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 LRRC77P-213ENST00000637727 880 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 AP000553.6-201ENST00000641242 118 ntBASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP1AQ9HD42 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CHMP1AQ9HD42 AP004289.2-201ENST00000444413 1457 ntBASIC3.09□□□□□ -1.92
CHMP1AQ9HD42 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CHMP1AQ9HD42 AL137003.2-201ENST00000606924 2538 ntBASIC3.09□□□□□ -1.92
CHMP1AQ9HD42 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 MTND5P7-201ENST00000413558 1798 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AL513302.2-201ENST00000562313 1842 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 UBE2L2-201ENST00000254302 429 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNU1-75P-201ENST00000347264 129 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 FTLP6-201ENST00000355274 422 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNU6-181P-201ENST00000363225 107 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNU6-512P-201ENST00000364438 103 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AP002088.1-201ENST00000382740 395 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNU6-217P-201ENST00000384164 104 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNU6-1035P-201ENST00000384477 107 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 Y_RNA.582-201ENST00000391023 95 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 SOD2P1-201ENST00000396543 562 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC010975.2-201ENST00000427781 588 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC133104.1-201ENST00000429100 218 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RPL23AP30-201ENST00000432419 501 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 C1DP4-201ENST00000455429 424 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 TPTE2P5-203ENST00000458118 728 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC084357.1-201ENST00000473404 255 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC026427.2-201ENST00000506228 536 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms