Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC034105.3-201ENST00000565294 442 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 SNRPGP15-201ENST00000600149 222 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AL035413.2-201ENST00000604801 525 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AL353748.2-201ENST00000622148 471 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 C2orf27A-204ENST00000623058 969 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC138649.5-201ENST00000637456 137 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 MTCO1P9-201ENST00000505577 1534 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 RNY3P3-201ENST00000363816 102 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 RNA5SP167-201ENST00000365461 116 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 RNU6-432P-201ENST00000384196 109 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 MT-TL1-201ENST00000386347 75 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 RNA5SP107-201ENST00000411358 122 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 CCDC58P2-201ENST00000417131 366 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 ZNF90P2-204ENST00000419323 1075 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AL121601.2-201ENST00000438019 707 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AL138799.3-201ENST00000438968 350 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC016691.1-201ENST00000441321 413 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC140076.1-201ENST00000449897 361 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 PRSS3P4-201ENST00000453323 162 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AC060780.3-201ENST00000589464 80 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 XIAPP1-201ENST00000603162 600 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AL049634.3-201ENST00000604968 457 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 AL121992.2-201ENST00000606262 256 ntBASIC3.82□□□□□ -1.8
USP29Q9HBJ7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP29Q9HBJ7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 CASC19-280ENST00000642102 1351 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 SNORA31-201ENST00000362607 130 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RNU6-451P-201ENST00000362921 107 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 SNORA72.1-201ENST00000363485 129 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 SNORA73.2-201ENST00000364946 201 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 Y_RNA.367-201ENST00000365544 101 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RNU6-877P-201ENST00000383868 107 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 SNORA69-201ENST00000383895 132 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 SNORA5A-201ENST00000384111 134 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RPL21P17-201ENST00000397467 475 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AL109755.1-201ENST00000401791 649 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RN7SKP285-201ENST00000410137 318 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 SNRPEP10-201ENST00000420249 274 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AL137014.1-201ENST00000420490 1226 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC099677.1-201ENST00000420575 175 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC002075.2-201ENST00000425207 252 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 OR2AS1P-201ENST00000427827 319 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 MED13P1-201ENST00000428342 171 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RPL23AP83-201ENST00000434984 473 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 HMGB3P8-201ENST00000449709 577 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AL356010.1-201ENST00000456364 102 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC004801.2-202ENST00000463559 283 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RPL31P13-201ENST00000484151 370 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RPS15AP36-201ENST00000492022 382 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 MTCYBP18-201ENST00000501056 747 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC117522.1-201ENST00000509821 380 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 IGKV2-23-201ENST00000518729 323 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms