Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC104662.1-201ENST00000604448 511 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 AC113194.1-201ENST00000606037 500 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 AL157817.1-201ENST00000614264 790 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 AC133104.2-201ENST00000615272 193 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 AC006133.1-201ENST00000617106 264 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 MIR6500-201ENST00000622700 86 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 AC067931.1-201ENST00000624190 671 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 PHKBP1-201ENST00000450951 1951 ntBASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BCAS3Q9H6U6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 TPTE2P4-201ENST00000258589 1605 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RNU6-1115P-201ENST00000362490 106 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RNU6-574P-201ENST00000384265 107 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 SNORA24.1-201ENST00000384401 135 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RNU6-328P-201ENST00000390887 106 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RNU6-754P-201ENST00000391166 107 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 SOD2P1-201ENST00000396543 562 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 SNORA11.1-201ENST00000408133 129 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 CYCSP19-201ENST00000411715 316 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RPS23P10-201ENST00000416185 486 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC009302.1-201ENST00000417147 390 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 ZNF734P-201ENST00000419494 1534 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RPL31P12-201ENST00000422587 358 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RPL7P46-201ENST00000425129 740 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AL035666.1-201ENST00000446195 348 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 PPIAP3-201ENST00000450588 505 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC002553.2-201ENST00000453217 340 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 SNORA67.7-201ENST00000516664 135 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RNU6-352P-201ENST00000516908 107 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RNU6-64P-201ENST00000517119 105 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 RN7SKP295-201ENST00000517264 153 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 FAM60DP-201ENST00000524174 632 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AP003122.3-201ENST00000526316 255 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 COX6CP5-201ENST00000527162 228 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 SETP7-201ENST00000552169 453 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 MIR4680-201ENST00000580906 66 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 MIR5583-1-201ENST00000580941 59 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC244517.1-201ENST00000606030 2086 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 AC099669.2-201ENST00000616549 437 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 MIR6075-201ENST00000620782 95 ntBASIC4.59□□□□□ -1.67
BCAS3Q9H6U6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.59□□□□□ -1.68
BCAS3Q9H6U6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
BCAS3Q9H6U6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
BCAS3Q9H6U6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 Y_RNA.5-201ENST00000362334 102 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 SNORD116-11-201ENST00000383882 92 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RNU6-1032P-201ENST00000384100 107 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 Y_RNA.576-201ENST00000384781 102 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 MIR554-201ENST00000384874 96 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RNU6-308P-201ENST00000390957 107 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 MIR1179-201ENST00000408703 91 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 Y_RNA.605-201ENST00000410577 105 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RPL7P2-201ENST00000427639 268 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RPL21P23-201ENST00000446654 460 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RPL7L1P1-201ENST00000448259 785 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RPS27AP1-201ENST00000475545 471 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RPL21P93-201ENST00000480465 489 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RPS27P27-201ENST00000498779 255 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RNU6-1092P-201ENST00000516955 87 ntBASIC4.58□□□□□ -1.68
BCAS3Q9H6U6 RNU6-685P-201ENST00000517088 95 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms