Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC099522.1-202ENST00000514718 367 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 RNU4-49P-201ENST00000516080 140 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AP004242.1-201ENST00000533701 349 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AP000763.2-201ENST00000540641 163 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC006270.2-201ENST00000578523 652 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 MIR5583-1-201ENST00000580941 59 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AL117336.2-201ENST00000602435 335 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC092807.2-201ENST00000609367 243 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 C2orf27A-204ENST00000623058 969 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC005858.4-201ENST00000623191 700 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AL359697.1-201ENST00000624879 587 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 MIR492-201ENST00000638676 116 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 AC016588.2-201ENST00000632484 3021 ntBASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC113Q9H0I3 MIR448-201ENST00000362131 111 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 RNU6-82P-201ENST00000363970 107 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 Y_RNA.378-201ENST00000365652 113 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 MTND3P8-201ENST00000412909 339 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AL353678.1-201ENST00000422735 741 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 COX6B1P7-201ENST00000430845 235 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 RNU6-1208P-201ENST00000459588 107 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AP001086.1-201ENST00000494882 321 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 Y_RNA.654-201ENST00000497848 106 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 VWA8P1-201ENST00000510889 176 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC108043.1-201ENST00000512696 574 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 Y_RNA.665-201ENST00000516177 98 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 RN7SKP21-201ENST00000516503 220 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC005498.1-201ENST00000592125 465 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC007390.2-201ENST00000606229 3803 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 AC009570.1-201ENST00000609599 745 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 uc_338.5-201ENST00000611839 155 ntBASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CCDC113Q9H0I3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 UBE2L2-201ENST00000254302 429 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP52-201ENST00000362448 134 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 Y_RNA.530-201ENST00000384587 101 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 SNORD70.1-201ENST00000391007 85 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AL591704.1-201ENST00000432574 275 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP246-201ENST00000458909 119 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AC083904.1-201ENST00000487828 231 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP154-201ENST00000516193 111 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AL118558.2-201ENST00000556294 238 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 U2.17-201ENST00000611454 95 ntBASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC113Q9H0I3 AC018529.3-201ENST00000624212 2254 ntBASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC113Q9H0I3 RNU6-50P-201ENST00000362356 103 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms