Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 U3.42-201ENST00000408746 214 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 RNA5SP274-201ENST00000410484 108 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 RNU2-8P-201ENST00000410727 190 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AC245054.2-201ENST00000415639 319 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL590383.1-201ENST00000428602 75 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 AP000936.2-201ENST00000447151 681 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 TPT1P14-201ENST00000448018 505 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 MTND1P29-201ENST00000448112 647 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL162389.1-201ENST00000449233 177 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL590365.1-201ENST00000450788 243 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AC146507.2-201ENST00000460608 476 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 MTND4LP3-201ENST00000468320 276 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 SNORA31.22-201ENST00000517204 135 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AC125611.2-201ENST00000551907 647 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL133153.1-201ENST00000557756 303 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL356432.3-201ENST00000568952 465 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 MIR5697-201ENST00000578045 78 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 TUG1_2.1-201ENST00000614234 87 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.69□□□□□ -1.82
USP44Q9H0E7 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP44Q9H0E7 AC008568.2-201ENST00000623862 2313 ntBASIC3.69□□□□□ -1.82
USP44Q9H0E7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP44Q9H0E7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP44Q9H0E7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP44Q9H0E7 FGF7P2-201ENST00000332473 296 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 RNU5A-1-201ENST00000362698 116 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 Y_RNA.51-201ENST00000362725 102 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 RNY3P10-201ENST00000384764 102 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 RPL5P18-201ENST00000406671 891 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC078974.1-201ENST00000411597 223 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC093156.1-201ENST00000440382 670 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AL662791.1-201ENST00000441992 928 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 AL360221.1-201ENST00000445989 335 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 RN7SL633P-201ENST00000488974 297 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 RN7SKP43-201ENST00000516173 320 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC245166.1-201ENST00000521012 253 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 AL133271.1-201ENST00000538229 291 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 EIF4BP1-201ENST00000554881 351 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC112191.3-201ENST00000604371 277 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 RNU6-87P-201ENST00000607561 108 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC239868.4-201ENST00000608318 671 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC025594.3-201ENST00000613068 790 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AC092140.2-201ENST00000618027 521 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 MIR7153-201ENST00000637758 57 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 AL136164.4-201ENST00000625013 2135 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AL390237.1-201ENST00000404226 1415 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 AP001148.1-201ENST00000624124 2359 ntBASIC3.68□□□□□ -1.82
USP44Q9H0E7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
USP44Q9H0E7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP44Q9H0E7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 AC093831.2-201ENST00000624393 3427 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 RNU6-525P-201ENST00000363685 104 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 SNORA23-201ENST00000365128 182 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 Y_RNA.318-201ENST00000365131 97 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 TXNP7-201ENST00000406296 293 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AP000567.1-201ENST00000406413 156 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 BTF3L4P1-201ENST00000413813 468 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 USP12PX-201ENST00000432383 1057 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AC010153.1-201ENST00000432862 727 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 TXNP1-201ENST00000441872 371 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 ELOCP30-201ENST00000447108 299 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 HMGB3P8-201ENST00000449709 577 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 UQCRHP3-201ENST00000451503 251 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 snoU109.1-201ENST00000459339 135 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 RN7SL75P-201ENST00000461926 281 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 AF131216.2-201ENST00000512316 564 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AC091965.2-201ENST00000512324 613 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 Y_RNA.695-201ENST00000516715 107 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 RPL12P22-201ENST00000519073 490 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms