Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC140076.1-201ENST00000449897 361 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 TRBV26-201ENST00000456572 344 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC008155.2-201ENST00000464337 397 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 NIPA2P2-201ENST00000496376 1083 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC020893.1-201ENST00000502452 580 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC093677.1-201ENST00000514414 678 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 SNORA40.12-201ENST00000516329 111 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC034105.3-201ENST00000565294 442 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 HMGB1P6-201ENST00000569046 646 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 MIR4425-201ENST00000580572 84 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 BBIP1P1-201ENST00000602999 279 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC084757.4-201ENST00000616350 526 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 MIR6864-201ENST00000617935 70 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC091953.5-201ENST00000622919 233 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC243312.2-201ENST00000623340 601 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AL645937.1-201ENST00000641739 1652 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC007390.2-201ENST00000606229 3803 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AL161781.1-201ENST00000354277 403 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RNA5SP197-201ENST00000363357 119 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RN7SKP44-201ENST00000363602 316 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RNU6-343P-201ENST00000364709 104 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RNU6-169P-201ENST00000365336 107 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 Y_RNA.431-201ENST00000384086 102 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RNU6-456P-201ENST00000384493 107 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 MIR153-1-201ENST00000384914 90 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RNU6-332P-201ENST00000391193 108 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AL356432.1-201ENST00000405809 419 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 Z99755.1-201ENST00000414048 380 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 MTCO3P46-201ENST00000425787 232 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC096632.1-201ENST00000427395 310 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 YME1L1P1-201ENST00000429435 297 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AL606489.2-201ENST00000433886 234 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 TAAR7P-201ENST00000436141 242 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RPL7P49-201ENST00000471402 708 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC010587.1-201ENST00000505809 469 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 TXNP6-201ENST00000510190 310 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 SNORD60.2-201ENST00000516883 86 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 IGKV2-26-201ENST00000518305 343 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC123904.2-201ENST00000548059 300 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC011611.1-201ENST00000552179 197 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RPL21P12-201ENST00000559810 515 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC022432.1-201ENST00000595739 310 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 RPL23AP92-201ENST00000603609 255 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC113194.1-201ENST00000606037 500 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.21□□□□□ -1.74
SALL3Q9BXA9 AL160413.1-201ENST00000622780 310 ntBASIC4.21□□□□□ -1.74
SALL3Q9BXA9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC097714.1-201ENST00000511272 1647 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 SNORA20.2-201ENST00000383922 131 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 RNU6-1158P-201ENST00000391167 107 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 DSTNP4-201ENST00000399472 474 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AL354751.2-201ENST00000415471 210 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 HSPD1P21-201ENST00000436541 245 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC016691.1-201ENST00000441321 413 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC025518.1-201ENST00000479856 347 ntBASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.2□□□□□ -1.74
SALL3Q9BXA9 AC018797.3-201ENST00000513388 1241 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms