Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX3Q99909 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 KC877373.1-201ENST00000479066 408 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 RPS3AP43-201ENST00000479743 781 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC025518.1-201ENST00000479856 347 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SSX3Q99909 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX3Q99909 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 AC074250.1-201ENST00000511117 192 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 RNU6-64P-201ENST00000517119 105 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 RNA5SP291-201ENST00000517222 105 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC106038.2-201ENST00000520706 568 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX3Q99909 AC007115.1-201ENST00000546853 234 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC123904.2-201ENST00000548059 300 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC093012.1-202ENST00000549403 582 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC011611.1-201ENST00000552179 197 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX3Q99909 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 AL136363.1-201ENST00000605349 337 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC105129.3-201ENST00000605455 485 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC245517.5-201ENST00000611529 162 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AL355365.1-201ENST00000616480 294 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 SNHG22-203ENST00000617833 660 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC009159.1-201ENST00000618386 642 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
SSX3Q99909 AC007494.3-201ENST00000624660 743 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC010149.2-201ENST00000637608 315 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC009487.2-201ENST00000420969 6821 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC138915.1-201ENST00000565427 1685 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SSX3Q99909 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.84□□□□□ -1.96
SSX3Q99909 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SSX3Q99909 AC008669.1-201ENST00000565823 2178 ntBASIC2.84□□□□□ -1.96
SSX3Q99909 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
SSX3Q99909 AC068647.1-201ENST00000489539 2265 ntBASIC2.84□□□□□ -1.96
SSX3Q99909 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SSX3Q99909 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSX3Q99909 FRG1CP-201ENST00000358464 769 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RNU6-1180P-201ENST00000364935 107 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 SNORA70.4-201ENST00000365509 134 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RPL21P75-201ENST00000396599 483 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSX3Q99909 RPL21P28-201ENST00000401418 483 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AL592114.1-201ENST00000403842 483 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RNU6-193P-201ENST00000410977 107 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RPL7P8-201ENST00000411964 730 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.83□□□□□ -1.96
SSX3Q99909 MTND2P18-201ENST00000419962 1030 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX3Q99909 AL353777.1-201ENST00000425552 326 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX3Q99909 WASF1P1-201ENST00000447560 1131 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 EPS15P1-201ENST00000448836 336 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 snoU13.22-201ENST00000459428 104 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RNU7-23P-201ENST00000459465 62 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RPL21P39-201ENST00000463605 483 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AP000797.1-201ENST00000478870 387 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RPL21P93-201ENST00000480465 489 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC087190.1-201ENST00000484462 480 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AP000563.1-201ENST00000490865 758 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC093591.1-201ENST00000491435 481 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 RPL21P16-201ENST00000495531 483 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 HSPD1P15-201ENST00000505573 1122 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX3Q99909 MIR2276-201ENST00000516886 89 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX3Q99909 AC100870.1-201ENST00000522035 505 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC007458.1-201ENST00000542812 373 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 MRPS36P5-201ENST00000551909 298 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 ZNF519P3-201ENST00000557158 1032 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 TRAV28-201ENST00000557548 323 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX3Q99909 AC135628.1-201ENST00000568867 534 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC010546.1-201ENST00000569391 485 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 ROCK1P1-201ENST00000573767 549 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 MIR3915-201ENST00000578518 97 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX3Q99909 KC877982.1-201ENST00000602313 470 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC121334.2-201ENST00000605387 271 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 AC027807.2-201ENST00000616099 408 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 MIR7975-201ENST00000619350 68 ntBASIC2.83□□□□□ -1.96
SSX3Q99909 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX3Q99909 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SSX3Q99909 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SSX3Q99909 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSX3Q99909 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX3Q99909 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.83□□□□□ -1.96
SSX3Q99909 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSX3Q99909 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SSX3Q99909 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX3Q99909 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX3Q99909 MIR208A-201ENST00000362287 71 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 RNU4-35P-201ENST00000362588 141 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 SNORD56.3-201ENST00000363507 71 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 RNA5SP387-201ENST00000364226 106 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms