Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ATP5F1P5-201ENST00000526403 760 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS2Q99743 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.62□□□□□ -1.99
NPAS2Q99743 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS2Q99743 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS2Q99743 AL391261.3-201ENST00000557194 520 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AL049838.1-201ENST00000563647 981 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 MIR4319-201ENST00000577285 85 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC138761.3-201ENST00000579993 334 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 MIR3670-2-201ENST00000582974 65 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 MIR3670-1-201ENST00000584160 65 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 MIR3670-3-201ENST00000584855 65 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS2Q99743 MTCO2P2-201ENST00000591258 225 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC005498.1-201ENST00000592125 465 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC090186.1-201ENST00000605991 572 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 MIR3670-4-201ENST00000612260 65 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS2Q99743 AC019226.1-201ENST00000625666 515 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NPAS2Q99743 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NPAS2Q99743 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.61□□□□□ -1.99
NPAS2Q99743 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.61□□□□□ -1.99
NPAS2Q99743 AC099786.3-201ENST00000565735 1410 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NPAS2Q99743 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NPAS2Q99743 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NPAS2Q99743 SNORA25.6-201ENST00000364121 118 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 RNU6-744P-201ENST00000365557 107 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 RNU6-1316P-201ENST00000384242 108 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 RNU2-25P-201ENST00000411041 191 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NPAS2Q99743 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.61□□□□□ -1.99
NPAS2Q99743 RPS20P5-201ENST00000434808 360 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 DDX3P2-201ENST00000446138 111 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 RPL21P134-201ENST00000453468 483 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.61□□□□□ -1.99
NPAS2Q99743 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.61□□□□□ -1.99
NPAS2Q99743 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
NPAS2Q99743 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.61□□□□□ -1.99
NPAS2Q99743 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NPAS2Q99743 RPL12P50-201ENST00000603116 116 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.61□□□□□ -1.99
NPAS2Q99743 AC131235.4-201ENST00000609288 620 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 BX664608.1-201ENST00000610519 487 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 AC131902.3-201ENST00000611767 581 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 AC107075.1-201ENST00000613695 314 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NPAS2Q99743 MTND1P37-201ENST00000636562 264 ntBASIC2.61□□□□□ -1.99
NPAS2Q99743 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.61□□□□□ -1.99
NPAS2Q99743 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NPAS2Q99743 AC062016.1-201ENST00000355719 319 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 U3.20-201ENST00000390909 217 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 RNU6-1242P-201ENST00000391052 103 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AL513475.1-201ENST00000406602 315 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.6□□□□□ -1.99
NPAS2Q99743 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AL513331.1-201ENST00000411908 397 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 RAP1BP1-201ENST00000412709 553 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 BX682237.1-201ENST00000415016 335 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AC106883.1-201ENST00000418805 562 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 NANOGP5-201ENST00000424456 877 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC092648.1-201ENST00000425870 423 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 GTF2IP20-201ENST00000431663 360 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.6□□□□□ -1.99
NPAS2Q99743 UBE2V1P13-201ENST00000436983 439 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 COX7BP2-201ENST00000437976 242 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.6□□□□□ -1.99
NPAS2Q99743 RPS15AP27-201ENST00000449183 343 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 DUXAP8-207ENST00000456786 622 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.6□□□□□ -1.99
NPAS2Q99743 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AC126182.1-201ENST00000478134 357 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.6□□□□□ -1.99
NPAS2Q99743 GTF2IP9-201ENST00000502460 301 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC022447.3-201ENST00000506865 495 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC114786.4-201ENST00000508771 728 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AC114797.1-201ENST00000514003 728 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.6□□□□□ -1.99
NPAS2Q99743 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
NPAS2Q99743 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AC087465.1-201ENST00000560574 245 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC023813.2-201ENST00000564321 469 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AP001269.3-201ENST00000588718 329 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AC006270.3-201ENST00000605967 1036 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AC027449.1-201ENST00000608890 407 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms