Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC004865.1-201ENST00000442276 1003 ntBASIC2.15□□□□□ -2.06
SCAF11Q99590 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.15□□□□□ -2.06
SCAF11Q99590 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.15□□□□□ -2.06
SCAF11Q99590 MIR4504-201ENST00000577413 92 ntBASIC2.15□□□□□ -2.06
SCAF11Q99590 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.15□□□□□ -2.06
SCAF11Q99590 AP000676.4-201ENST00000624659 623 ntBASIC2.15□□□□□ -2.06
SCAF11Q99590 MIR203B-201ENST00000636080 86 ntBASIC2.15□□□□□ -2.06
SCAF11Q99590 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.14□□□□□ -2.07
SCAF11Q99590 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.14□□□□□ -2.07
SCAF11Q99590 UBE2V2P3-201ENST00000433562 437 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAF11Q99590 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SCAF11Q99590 AC133963.2-201ENST00000513686 578 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AC087808.1-201ENST00000520501 361 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 MTCO1P47-201ENST00000523889 1271 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AC107954.1-201ENST00000565906 727 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 ADAM3B-201ENST00000569937 840 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AL590282.1-201ENST00000610379 1136 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 uc_338.12-201ENST00000616344 181 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AC009032.1-201ENST00000617574 431 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AL133216.2-202ENST00000634512 349 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.14□□□□□ -2.07
SCAF11Q99590 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCAF11Q99590 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCAF11Q99590 AL359851.1-201ENST00000569460 4997 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AL357078.2-201ENST00000416486 427 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 Z75741.2-201ENST00000417272 1167 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 HMGN1P33-201ENST00000432945 451 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 YWHAZP8-201ENST00000436935 731 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AL035407.2-201ENST00000454090 378 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.14□□□□□ -2.07
SCAF11Q99590 AC093767.1-201ENST00000504523 156 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 RN7SKP49-201ENST00000516675 260 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AC022634.1-201ENST00000520765 532 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AP004371.1-201ENST00000525240 214 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 MIR151B-201ENST00000584249 96 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 AC002487.1-201ENST00000604565 994 ntBASIC2.14□□□□□ -2.07
SCAF11Q99590 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAF11Q99590 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAF11Q99590 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SCAF11Q99590 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.13□□□□□ -2.07
SCAF11Q99590 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAF11Q99590 DSTNP4-201ENST00000399472 474 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 RNU2-25P-201ENST00000411041 191 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.13□□□□□ -2.07
SCAF11Q99590 AL354695.1-201ENST00000427935 228 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 AL121871.1-201ENST00000443413 436 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.13□□□□□ -2.07
SCAF11Q99590 MTCO3P35-201ENST00000485582 781 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.13□□□□□ -2.07
SCAF11Q99590 HMGB1P22-201ENST00000505315 124 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 AC034244.1-201ENST00000507687 207 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.13□□□□□ -2.07
SCAF11Q99590 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.13□□□□□ -2.07
SCAF11Q99590 DNAJC8P1-201ENST00000554535 372 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 MIR3122-201ENST00000577243 73 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 AC079610.2-201ENST00000604818 690 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 AC068831.7-201ENST00000616954 363 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 STMN1P1-201ENST00000617809 440 ntBASIC2.13□□□□□ -2.07
SCAF11Q99590 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCAF11Q99590 RNU6-234P-201ENST00000365229 104 ntBASIC2.12□□□□□ -2.07
SCAF11Q99590 AL589655.1-201ENST00000405398 482 ntBASIC2.12□□□□□ -2.07
SCAF11Q99590 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.12□□□□□ -2.07
SCAF11Q99590 AC008885.2-201ENST00000509506 930 ntBASIC2.12□□□□□ -2.07
SCAF11Q99590 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.12□□□□□ -2.07
SCAF11Q99590 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.12□□□□□ -2.07
SCAF11Q99590 AC020923.1-201ENST00000624021 917 ntBASIC2.12□□□□□ -2.07
SCAF11Q99590 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCAF11Q99590 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SCAF11Q99590 RNU6-50P-201ENST00000362356 103 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 RNU1-22P-201ENST00000363334 158 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 SNORA51.12-201ENST00000384448 134 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 RPL36P19-201ENST00000430744 301 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.11□□□□□ -2.07
SCAF11Q99590 AC068135.1-201ENST00000446164 246 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.11□□□□□ -2.07
SCAF11Q99590 RPS24P6-201ENST00000452670 400 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.11□□□□□ -2.07
SCAF11Q99590 RPS23P3-201ENST00000470993 430 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 RBM43P1-201ENST00000476891 1081 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.11□□□□□ -2.07
SCAF11Q99590 OR9N1P-202ENST00000494289 481 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 AC093281.2-201ENST00000510153 597 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.11□□□□□ -2.07
SCAF11Q99590 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.11□□□□□ -2.07
SCAF11Q99590 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.11□□□□□ -2.07
SCAF11Q99590 MIR6078-201ENST00000611069 100 ntBASIC2.11□□□□□ -2.07
SCAF11Q99590 AC116618.1-201ENST00000634617 774 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms