Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.16□□□□□ -2.06
VAT1Q99536 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC098614.2-201ENST00000426040 255 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 OR4K11P-201ENST00000431829 904 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.16□□□□□ -2.06
VAT1Q99536 AL049734.2-201ENST00000441066 616 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 BNIP3P2-201ENST00000441221 577 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 HMGN1P5-201ENST00000448591 263 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC079776.3-201ENST00000450665 370 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 EEF1B2P7-201ENST00000451177 676 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.16□□□□□ -2.06
VAT1Q99536 MTND2P24-201ENST00000453434 806 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC107626.1-201ENST00000471084 183 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VAT1Q99536 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.16□□□□□ -2.06
VAT1Q99536 AC026414.1-201ENST00000504046 698 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC104090.1-201ENST00000506341 1171 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.16□□□□□ -2.06
VAT1Q99536 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.16□□□□□ -2.06
VAT1Q99536 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VAT1Q99536 ATP5F1P5-201ENST00000526403 760 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 COX6CP5-201ENST00000527162 228 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.16□□□□□ -2.06
VAT1Q99536 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.16□□□□□ -2.06
VAT1Q99536 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.16□□□□□ -2.06
VAT1Q99536 TRAV28-201ENST00000557548 323 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 VN1R87P-201ENST00000596706 487 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AF131215.7-201ENST00000602443 707 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AL590099.1-201ENST00000615276 138 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 MIR6873-201ENST00000622788 63 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 CKAP2P1-201ENST00000555477 2049 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC107982.1-201ENST00000507171 1300 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.15□□□□□ -2.06
VAT1Q99536 XGY1-201ENST00000381172 446 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 HMGB1P17-201ENST00000403495 628 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.15□□□□□ -2.07
VAT1Q99536 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.15□□□□□ -2.07
VAT1Q99536 PTP4A1P7-201ENST00000423476 514 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 MTCO1P3-201ENST00000429327 192 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VAT1Q99536 SDCBPP1-201ENST00000440192 890 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 RPL7P36-201ENST00000444633 681 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AL591719.1-201ENST00000444669 744 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AL031659.1-201ENST00000447075 539 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AP1S2P1-201ENST00000457344 379 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AC090096.1-201ENST00000489168 390 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.15□□□□□ -2.07
VAT1Q99536 AL391261.3-201ENST00000557194 520 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.15□□□□□ -2.07
VAT1Q99536 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.15□□□□□ -2.07
VAT1Q99536 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.15□□□□□ -2.07
VAT1Q99536 AL355877.2-201ENST00000603670 358 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AL390208.1-201ENST00000605885 644 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 AC068880.4-201ENST00000623082 495 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VAT1Q99536 CU459211.1-201ENST00000635667 749 ntBASIC2.15□□□□□ -2.07
VAT1Q99536 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VAT1Q99536 Y_RNA.111-201ENST00000363248 100 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 RNU5E-8P-201ENST00000363502 116 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AL603865.2-201ENST00000401679 213 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AL079342.2-201ENST00000403367 482 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.14□□□□□ -2.07
VAT1Q99536 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.14□□□□□ -2.07
VAT1Q99536 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.14□□□□□ -2.07
VAT1Q99536 AL139421.1-201ENST00000423010 169 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.14□□□□□ -2.07
VAT1Q99536 PIGFP3-201ENST00000441918 722 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.14□□□□□ -2.07
VAT1Q99536 TRGVB-201ENST00000453257 471 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.14□□□□□ -2.07
VAT1Q99536 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC138853.1-201ENST00000503549 823 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC093801.2-201ENST00000503966 1050 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.14□□□□□ -2.07
VAT1Q99536 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC104417.1-201ENST00000523974 751 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VAT1Q99536 AC007115.1-201ENST00000546853 234 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.14□□□□□ -2.07
VAT1Q99536 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.14□□□□□ -2.07
VAT1Q99536 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.14□□□□□ -2.07
VAT1Q99536 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.14□□□□□ -2.07
VAT1Q99536 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.14□□□□□ -2.07
VAT1Q99536 MIR1273D-201ENST00000577266 86 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.14□□□□□ -2.07
VAT1Q99536 HMGN2P15-201ENST00000585707 270 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.14□□□□□ -2.07
VAT1Q99536 AL158211.4-201ENST00000606988 584 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AL590808.1-201ENST00000618696 141 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 AC002550.2-201ENST00000621246 394 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 MIR6852-201ENST00000621699 66 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 MIR7515-201ENST00000637837 67 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
VAT1Q99536 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms