Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF48Q96MX3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
ZNF48Q96MX3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
ZNF48Q96MX3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
ZNF48Q96MX3 AC130650.2-201ENST00000618736 2403 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MIR383-201ENST00000362257 73 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RNU6-335P-201ENST00000364563 113 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RNY3P13-201ENST00000365542 102 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RHOT1P2-201ENST00000366423 333 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 U1.1-201ENST00000384101 164 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RNU6-331P-201ENST00000384724 107 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MIR558-201ENST00000384920 94 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RNU6-308P-201ENST00000390957 107 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RNU6-903P-201ENST00000391270 109 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MTCYBP4-201ENST00000401524 249 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AL606923.1-201ENST00000406616 190 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MIR548K-201ENST00000408406 116 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 SNORA74C-2-201ENST00000411179 201 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 EI24P1-201ENST00000416584 867 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 FTH1P1-201ENST00000437933 532 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RPL32P28-201ENST00000443577 397 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RPS29P15-201ENST00000458329 171 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 snoU13.8-201ENST00000458890 104 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AL049714.1-201ENST00000466686 347 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AL136126.1-201ENST00000473603 402 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RPL23AP11-201ENST00000475260 469 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 PPIAP15-201ENST00000479662 484 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RPL23AP55-201ENST00000498163 452 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 UBE2CP3-201ENST00000502715 450 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC092436.1-201ENST00000506450 503 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MTCO3P44-201ENST00000510977 541 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 FTH1P21-201ENST00000512179 511 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC093303.1-201ENST00000514549 295 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MIR2116-201ENST00000517221 80 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 APOOP3-201ENST00000536787 586 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC128657.1-201ENST00000549459 145 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC063950.1-201ENST00000552036 308 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 SNRPGP18-201ENST00000553000 214 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 RPL21P12-201ENST00000559810 515 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC106785.1-201ENST00000565935 262 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MIR4424-201ENST00000585257 86 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MIR3942-201ENST00000585264 109 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 CYP2C61P-201ENST00000604072 290 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC103710.2-201ENST00000609912 942 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 MIR4727-201ENST00000622232 55 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC091925.1-201ENST00000623204 462 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC244517.12-201ENST00000623581 663 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 AC009902.3-201ENST00000606235 2172 ntBASIC3.56□□□□□ -1.84
ZNF48Q96MX3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF48Q96MX3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AL158163.1-201ENST00000603915 1649 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AP001350.1-201ENST00000601906 1524 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RNA5SP258-201ENST00000362750 119 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RNU6-97P-201ENST00000363387 104 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RNU5A-8P-201ENST00000364102 114 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RNA5SP151-201ENST00000365632 117 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 RNU1-44P-201ENST00000384453 163 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 MIR134-201ENST00000385258 73 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 AL022722.2-201ENST00000402519 180 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 HSPE1P26-201ENST00000405341 275 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 SNORA11F-201ENST00000408237 128 ntBASIC3.55□□□□□ -1.84
ZNF48Q96MX3 MIR548F5-201ENST00000408421 86 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms