Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL356596.1-201ENST00000624230 379 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 MTND5P33-201ENST00000571250 1450 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AP003122.5-201ENST00000527668 3766 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 RPL21P132-201ENST00000331267 462 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 SNORA72.3-201ENST00000365074 132 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 MIR1289-1-201ENST00000408836 144 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 RN7SKP140-201ENST00000411196 284 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AL359704.1-201ENST00000411586 781 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AL714022.1-201ENST00000439897 151 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 Z82210.1-201ENST00000440037 231 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 PIGFP3-201ENST00000441918 722 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 COX6CP2-201ENST00000444980 225 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 Z73417.1-201ENST00000447373 778 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 RPS29P12-201ENST00000460178 152 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC116337.2-201ENST00000477662 156 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 LARP1BP2-201ENST00000486594 519 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 MTND5P4-201ENST00000514978 288 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 SNORA9.3-201ENST00000516383 129 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC083760.1-201ENST00000589621 670 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AL161729.4-201ENST00000604650 476 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC008277.2-201ENST00000605196 797 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC097468.3-201ENST00000607956 456 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AL139418.1-201ENST00000613613 177 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AL355493.4-201ENST00000618530 292 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC099654.7-201ENST00000635788 2127 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
ZNF560Q96MR9 AC008669.1-201ENST00000565823 2178 ntBASIC2.97□□□□□ -1.93
ZNF560Q96MR9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.96□□□□□ -1.93
ZNF560Q96MR9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RNU6-433P-201ENST00000363216 104 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RNA5SP88-201ENST00000365560 109 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RNU1-39P-201ENST00000383897 165 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 MIR9-1-201ENST00000385198 89 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AL109755.1-201ENST00000401791 649 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 MTND4P13-201ENST00000402078 1023 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AL513331.1-201ENST00000411908 397 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AL008987.1-201ENST00000415528 237 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 HMGN2P30-201ENST00000423237 256 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AL445669.1-201ENST00000426743 755 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RPL23AP58-201ENST00000440453 469 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 FAM103A2P-201ENST00000444122 354 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 TPT1P14-201ENST00000448018 505 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 OR6K1P-201ENST00000456766 971 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AP1S2P1-201ENST00000457344 379 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC003982.1-202ENST00000469928 248 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RPS20P22-201ENST00000473700 357 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC004924.1-201ENST00000480160 781 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 RPS15AP36-201ENST00000492022 382 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC104685.1-201ENST00000502445 371 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 MIR3605-201ENST00000583214 100 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 U73023.1-201ENST00000603134 700 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC107952.2-201ENST00000606048 486 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AL627309.6-201ENST00000606857 840 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AL050303.3-201ENST00000613704 284 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AC108206.1-201ENST00000570186 4159 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 AL355596.1-201ENST00000565399 3996 ntBASIC2.96□□□□□ -1.94
ZNF560Q96MR9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF560Q96MR9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 SNORD113-6-201ENST00000363345 75 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms