Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SUMO2P20-201ENST00000520803 283 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AC022616.3-201ENST00000523940 148 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.01□□□□□ -1.77
SNX27Q96L92 AL845331.3-202ENST00000562856 261 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.01□□□□□ -1.77
SNX27Q96L92 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX27Q96L92 AC004067.1-201ENST00000608733 700 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.01□□□□□ -1.77
SNX27Q96L92 AP000553.6-201ENST00000641242 118 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AC119674.1-207ENST00000641355 633 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX27Q96L92 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX27Q96L92 OTUD4P1-201ENST00000237841 3067 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX27Q96L92 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX27Q96L92 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX27Q96L92 RNU6-173P-201ENST00000364215 104 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4□□□□□ -1.77
SNX27Q96L92 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4□□□□□ -1.77
SNX27Q96L92 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4□□□□□ -1.77
SNX27Q96L92 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4□□□□□ -1.77
SNX27Q96L92 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC024082.2-201ENST00000434771 238 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AL603825.1-201ENST00000438481 80 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4□□□□□ -1.77
SNX27Q96L92 RPS3AP46-201ENST00000448352 682 ntBASIC4□□□□□ -1.77
SNX27Q96L92 CEACAMP4-201ENST00000457676 421 ntBASIC4□□□□□ -1.77
SNX27Q96L92 snoU13.4-201ENST00000458916 104 ntBASIC4□□□□□ -1.77
SNX27Q96L92 VN1R104P-201ENST00000505115 1009 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC005921.1-201ENST00000510589 286 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4□□□□□ -1.77
SNX27Q96L92 AC008011.1-201ENST00000545989 227 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC123904.3-201ENST00000547218 814 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4□□□□□ -1.77
SNX27Q96L92 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4□□□□□ -1.77
SNX27Q96L92 MIR3186-201ENST00000577404 85 ntBASIC4□□□□□ -1.77
SNX27Q96L92 MIR5047-201ENST00000579212 100 ntBASIC4□□□□□ -1.77
SNX27Q96L92 MIR7106-201ENST00000612419 65 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AL360181.4-201ENST00000621752 134 ntBASIC4□□□□□ -1.77
SNX27Q96L92 AC092628.2-201ENST00000622492 339 ntBASIC4□□□□□ -1.77
SNX27Q96L92 SEPT14P19-203ENST00000633205 211 ntBASIC4□□□□□ -1.77
SNX27Q96L92 OR5H6-203ENST00000642105 978 ntBASIC4□□□□□ -1.77
SNX27Q96L92 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SNX27Q96L92 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX27Q96L92 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SNX27Q96L92 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX27Q96L92 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX27Q96L92 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SNX27Q96L92 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX27Q96L92 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SNX27Q96L92 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX27Q96L92 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX27Q96L92 ZNF807-201ENST00000328088 1707 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
SNX27Q96L92 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SNX27Q96L92 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX27Q96L92 AC005832.2-201ENST00000538921 1430 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SNX27Q96L92 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX27Q96L92 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
SNX27Q96L92 RNU6-181P-201ENST00000363225 107 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 Y_RNA.226-201ENST00000364337 114 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 SNORA23-201ENST00000365128 182 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 RNU6-169P-201ENST00000365336 107 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 RNU6-282P-201ENST00000365357 103 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX27Q96L92 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX27Q96L92 FCF1P9-201ENST00000412546 282 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 RPL21P24-201ENST00000413752 448 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 RPL21P66-201ENST00000426566 466 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 MTND1P4-201ENST00000435196 415 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC005094.1-201ENST00000440420 368 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX27Q96L92 HMGN2P7-201ENST00000456186 273 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX27Q96L92 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX27Q96L92 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX27Q96L92 RN7SKP18-201ENST00000516005 275 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 RNU6-445P-201ENST00000516949 107 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 RNU6-1220P-201ENST00000517126 108 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX27Q96L92 AC011979.2-201ENST00000527568 352 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 SNRPGP16-201ENST00000533275 226 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX27Q96L92 AL136363.1-201ENST00000605349 337 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC012443.1-201ENST00000605605 231 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX27Q96L92 AC103710.2-201ENST00000609912 942 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX27Q96L92 MIR486-1-201ENST00000612171 68 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC073534.2-201ENST00000620377 381 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC091905.1-201ENST00000624400 311 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 AC124864.2-201ENST00000624736 186 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX27Q96L92 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX27Q96L92 AC009812.4-201ENST00000569134 1805 ntBASIC3.99□□□□□ -1.77
SNX27Q96L92 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
SNX27Q96L92 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.99□□□□□ -1.77
SNX27Q96L92 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SNX27Q96L92 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms