Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 TMSB10P2-201ENST00000416049 131 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC113618.1-201ENST00000416747 285 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC073415.1-201ENST00000449240 153 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RNU7-152P-201ENST00000458982 64 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AL163973.1-201ENST00000484753 577 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC020890.1-201ENST00000491837 504 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RN7SL810P-201ENST00000493031 276 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AL359273.1-201ENST00000510918 627 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RN7SKP122-201ENST00000515923 296 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 SCARNA24.1-201ENST00000516465 137 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RNA5SP468-201ENST00000516782 93 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RN7SKP289-201ENST00000517244 295 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 IGKV2D-19-201ENST00000523346 262 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RPL21P12-201ENST00000559810 515 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RPL23AP84-201ENST00000571193 464 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 BDH2P1-201ENST00000602288 736 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 RNU6-89P-201ENST00000606519 100 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC005086.4-201ENST00000623065 213 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC110801.1-201ENST00000623590 212 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC011944.2-201ENST00000624440 683 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AL078596.1-201ENST00000624856 447 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 MTND4LP32-201ENST00000636111 270 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC105074.1-201ENST00000623380 3095 ntBASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP3Q96DZ5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AC125257.1-201ENST00000560400 2930 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 Y_RNA.31-201ENST00000362574 102 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 Y_RNA.231-201ENST00000364358 102 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RNU6-996P-201ENST00000365438 107 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RNU4-20P-201ENST00000365601 151 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AL356057.3-201ENST00000402607 340 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 HSPE1P26-201ENST00000405341 275 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RNA5SP129-201ENST00000410276 118 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RNU2-37P-201ENST00000410695 177 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RNU4-14P-201ENST00000410858 122 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AC011933.1-201ENST00000413334 321 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AL451054.2-201ENST00000420896 202 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 HSPE1P1-201ENST00000421494 318 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RPL7L1P10-201ENST00000427790 463 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 PHBP16-201ENST00000446318 950 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 GAPDHP27-201ENST00000447427 1020 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 MTND3P16-201ENST00000452205 344 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 PPP1R2P5-201ENST00000457256 603 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AC116533.1-201ENST00000459748 321 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 HMGB3P15-201ENST00000507326 574 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 SNORA25.17-201ENST00000517184 124 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RN7SKP256-201ENST00000517201 314 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 NARSP2-201ENST00000518524 679 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AP000827.1-201ENST00000527814 258 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AC069240.1-201ENST00000548774 375 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 BNIP3P6-201ENST00000549284 499 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AL163153.1-201ENST00000554223 283 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 RPL21P7-201ENST00000557463 483 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 ATP5J2P6-201ENST00000565203 266 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 GLUD1P4-201ENST00000590914 418 ntBASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP3Q96DZ5 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
CLIP3Q96DZ5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLIP3Q96DZ5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms