Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AC073343.1-201ENST00000328239 651 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 RNU4-35P-201ENST00000362588 141 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 RNY4P14-201ENST00000363656 96 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 RNU6-1322P-201ENST00000364309 107 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 MIR1-2-201ENST00000384961 85 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 UBA52P6-201ENST00000399822 382 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 RPS4XP8-201ENST00000402039 771 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 DBIP2-201ENST00000419076 262 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AL353193.1-201ENST00000421444 268 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 HMGB3P12-201ENST00000438745 556 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AC010631.1-201ENST00000474150 156 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 Y_RNA.704-201ENST00000516851 102 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 SNRPGP16-201ENST00000533275 226 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 AC234778.2-201ENST00000566241 354 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 HMGB1P6-201ENST00000569046 646 ntBASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM43Q96BQ3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 Y_RNA.256-201ENST00000364594 104 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RNU5E-6P-201ENST00000365574 115 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RNU6-74P-201ENST00000384235 107 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 MIR607-201ENST00000385241 96 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL359634.1-202ENST00000404721 284 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RNU2-39P-201ENST00000410604 198 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 HMGB3P20-201ENST00000417997 600 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RPL21P66-201ENST00000426566 466 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC000111.3-201ENST00000433478 193 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RPL7P54-201ENST00000438336 674 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL138799.3-201ENST00000438968 350 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 BNIP3P2-201ENST00000441221 577 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RPL23AP31-201ENST00000456160 467 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RN7SL585P-201ENST00000470538 280 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 RN7SL432P-201ENST00000484057 298 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC108860.1-201ENST00000484521 383 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 NIPA2P2-201ENST00000496376 1083 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC005921.1-201ENST00000510589 286 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 PHBP14-201ENST00000512887 367 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 SNORA31.22-201ENST00000517204 135 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 IGLV3-26-201ENST00000520756 302 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AK6P1-201ENST00000540219 478 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC068135.2-201ENST00000569293 1028 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC008638.3-201ENST00000603341 463 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL139395.1-201ENST00000603662 160 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL670379.6-201ENST00000603753 252 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL670379.11-201ENST00000604059 253 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC007621.1-201ENST00000604544 437 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AC008162.1-201ENST00000604718 254 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL670379.1-201ENST00000604752 252 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL670379.5-201ENST00000605253 252 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL670379.12-201ENST00000605291 253 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL670379.8-201ENST00000605353 252 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AL670379.7-201ENST00000605823 252 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 AP001596.2-201ENST00000608410 312 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 SDR42E1P2-201ENST00000614861 481 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 BDP1P-201ENST00000582658 1990 ntBASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM43Q96BQ3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM43Q96BQ3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
TRIM43Q96BQ3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms