Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AC009269.6-201ENST00000621778 588 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 FO624990.1-201ENST00000636373 85 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 RNU6-223P-201ENST00000362830 107 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AL138827.1-201ENST00000402666 306 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AL513175.2-201ENST00000422071 443 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 MRPL50P4-201ENST00000446432 475 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 FCF1P6-201ENST00000456841 595 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 AP000852.1-201ENST00000472460 573 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 RPL36AP51-201ENST00000487216 318 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 RNU1-104P-201ENST00000517280 175 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC023538.1-201ENST00000534576 736 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 MIR3670-2-201ENST00000582974 65 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 MIR3670-1-201ENST00000584160 65 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 MIR3670-3-201ENST00000584855 65 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 UBE2L4-201ENST00000587688 464 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 AL157392.4-201ENST00000609756 345 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 MIR3670-4-201ENST00000612260 65 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 AL158801.5-201ENST00000623123 465 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC47Q96A33 AL359693.1-201ENST00000614959 2407 ntBASIC3.02□□□□□ -1.93
CCDC47Q96A33 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC47Q96A33 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC47Q96A33 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 RNU6-884P-201ENST00000363889 107 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 MIR620-201ENST00000385232 95 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 MIR320C1-201ENST00000408566 88 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 MTCO1P17-201ENST00000411522 491 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC47Q96A33 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 AC104389.3-201ENST00000445629 235 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 AC233279.1-201ENST00000455300 423 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 RPL26P9-201ENST00000457466 433 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 RPS29P20-201ENST00000489592 171 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 MTND5P4-201ENST00000514978 288 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 RNU6-390P-201ENST00000516259 103 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC47Q96A33 AL596327.1-201ENST00000603629 213 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC47Q96A33 AC135507.1-201ENST00000607214 561 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 PCMTD1P7-201ENST00000634506 357 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 AC093536.2-201ENST00000565257 1406 ntBASIC3.01□□□□□ -1.93
CCDC47Q96A33 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3□□□□□ -1.93
CCDC47Q96A33 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC47Q96A33 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 RNA5SP21-201ENST00000410917 96 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 AC083875.1-201ENST00000419509 405 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3□□□□□ -1.93
CCDC47Q96A33 RPS24P13-201ENST00000442520 397 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 MTCO1P27-201ENST00000448269 226 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 AP000542.1-201ENST00000448473 371 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3□□□□□ -1.93
CCDC47Q96A33 AP000705.1-201ENST00000454567 350 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 S100A11P2-201ENST00000467589 312 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3□□□□□ -1.93
CCDC47Q96A33 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC47Q96A33 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3□□□□□ -1.93
CCDC47Q96A33 AC105252.1-201ENST00000503089 286 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3□□□□□ -1.93
CCDC47Q96A33 NDUFB4P2-201ENST00000509515 391 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 AC093281.2-201ENST00000510153 597 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3□□□□□ -1.93
CCDC47Q96A33 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3□□□□□ -1.93
CCDC47Q96A33 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3□□□□□ -1.93
CCDC47Q96A33 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3□□□□□ -1.93
CCDC47Q96A33 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC47Q96A33 MIR4509-3-201ENST00000578671 94 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 MIR4635-201ENST00000583759 79 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 MIR4509-2-201ENST00000583920 94 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 VN1R92P-201ENST00000598511 928 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 MIR4509-1-201ENST00000618224 94 ntBASIC3□□□□□ -1.93
CCDC47Q96A33 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3□□□□□ -1.93
CCDC47Q96A33 AC099654.9-201ENST00000637055 678 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms