Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF3Q8TEJ3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF3Q8TEJ3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF3Q8TEJ3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF3Q8TEJ3 MFSD8-236ENST00000641509 4050 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 Y_RNA.47-201ENST00000362697 108 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RNA5SP119-201ENST00000362715 117 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RNU6-251P-201ENST00000363235 104 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 Y_RNA.187-201ENST00000363918 113 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 Y_RNA.255-201ENST00000364581 97 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RNU6-657P-201ENST00000383904 107 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 Y_RNA.476-201ENST00000384347 108 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RNA5SP44-201ENST00000410446 133 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC019097.1-201ENST00000424783 735 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RPL23AP30-201ENST00000432419 501 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 SNRPEP7-201ENST00000438350 220 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 snoU13.22-201ENST00000459428 104 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 U8.20-201ENST00000459445 131 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RPS4XP10-201ENST00000465034 731 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC010301.1-201ENST00000473936 355 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC026726.1-201ENST00000512859 601 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 NARSP2-201ENST00000518524 679 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC090572.1-201ENST00000519251 160 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC022861.1-201ENST00000522981 663 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC023442.1-201ENST00000531247 422 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 MIR3118-1-201ENST00000581787 76 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 MIR3922-201ENST00000585192 84 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 Z84480.1-201ENST00000605131 311 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 RNU6-89P-201ENST00000606519 100 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC069200.1-201ENST00000609511 323 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 BX664608.1-201ENST00000610519 487 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC009318.4-201ENST00000620496 486 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AC067931.1-201ENST00000624190 671 ntBASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SH3RF3Q8TEJ3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 RNU6-108P-201ENST00000365558 107 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 RNU6-730P-201ENST00000383954 104 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 MIR514A2-201ENST00000385131 88 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 MIR514A3-201ENST00000385132 88 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 MRPL42P2-201ENST00000403169 426 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC078974.1-201ENST00000411597 223 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 HMGB3P2-201ENST00000411913 584 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 RPS12P24-201ENST00000412619 387 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC127526.1-201ENST00000417526 366 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC068533.1-201ENST00000418542 415 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AL353777.1-201ENST00000425552 326 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC011742.1-201ENST00000431448 434 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 MTND3P16-201ENST00000452205 344 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 RPS24P6-201ENST00000452670 400 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC007547.1-201ENST00000462177 490 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC084198.1-201ENST00000477747 402 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 HMGN1P11-201ENST00000508668 303 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 Y_RNA.665-201ENST00000516177 98 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 RNA5SP164-201ENST00000516533 110 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 HIGD1AP6-201ENST00000521833 279 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC022616.3-201ENST00000523940 148 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC123904.2-201ENST00000548059 300 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC069240.1-201ENST00000548774 375 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 BNIP3P6-201ENST00000549284 499 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC090877.1-201ENST00000561418 344 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 CYP2C61P-201ENST00000604072 290 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AL391813.2-201ENST00000609113 322 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 AC009237.17-201ENST00000618111 748 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 RMST_9.1-201ENST00000619945 193 ntBASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.5□□□□□ -1.69
SH3RF3Q8TEJ3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms