Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC007275.1-201ENST00000621243 671 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL360181.4-201ENST00000621752 134 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL359851.1-201ENST00000569460 4997 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 ZNF519P1-201ENST00000449011 1626 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL121972.1-201ENST00000402023 252 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 ELOCP11-201ENST00000436690 332 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 ELOCP16-201ENST00000444494 332 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 SNORA31.20-201ENST00000517111 133 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MTCO3P24-201ENST00000572729 782 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL391646.1-201ENST00000603860 190 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC107214.2-201ENST00000608204 634 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC008555.8-201ENST00000623602 2168 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC090774.1-201ENST00000435925 246 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC104564.1-201ENST00000493028 407 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RNA5SP436-201ENST00000516020 115 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 OR10V3P-201ENST00000525712 725 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 COX6CP3-201ENST00000580869 223 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC079791.1-201ENST00000605356 973 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC013562.2-201ENST00000611632 603 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC104307.1-201ENST00000616142 196 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RNA5SP27-201ENST00000363839 119 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RNU4-52P-201ENST00000384209 138 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 PRRC2CP1-201ENST00000404428 159 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 SRIP3-201ENST00000413200 219 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 HSPE1P20-201ENST00000538133 289 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC009268.1-201ENST00000561352 1203 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 Y_RNA.433-201ENST00000384089 102 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 PNRC2P1-201ENST00000423940 420 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 OR8K4P-201ENST00000534608 872 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 SULT1C2P1-202ENST00000562418 459 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC002487.1-201ENST00000604565 994 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RNA5SP331-201ENST00000364986 107 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 MIR320A-201ENST00000385302 82 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL138880.1-201ENST00000405824 642 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 BLOC1S2P1-201ENST00000428431 301 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RN7SKP277-201ENST00000516895 283 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC125611.2-201ENST00000551907 647 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 NUTF2P8-201ENST00000604593 363 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC096586.1-201ENST00000610267 561 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL133216.2-202ENST00000634512 349 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AP006437.1-201ENST00000641440 3685 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RNU4-23P-201ENST00000362839 140 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AL030996.1-201ENST00000411430 235 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RPS20P15-201ENST00000412792 311 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RPS6P14-201ENST00000425165 719 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RPL21P66-201ENST00000426566 466 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RPL35AP22-201ENST00000436855 335 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 C1DP5-201ENST00000525775 383 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 ZNF705CP-201ENST00000530515 889 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 PRELID2P1-201ENST00000552837 301 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC023813.2-201ENST00000564321 469 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC010928.2-201ENST00000588017 287 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 MIR6840-201ENST00000611937 71 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 AC008133.2-201ENST00000624540 351 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RNU6-263P-201ENST00000363811 107 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 RNA5SP160-201ENST00000364866 120 ntBASIC0.51□□□□□ -2.33
SYNE1Q8NF91 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms