Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC005498.1-201ENST00000592125 465 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 GAS5-AS1-201ENST00000602767 694 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC013444.2-201ENST00000603317 787 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AL355877.2-201ENST00000603670 358 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC090772.4-201ENST00000623599 362 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC010872.1-201ENST00000624225 675 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 MTND5P6-201ENST00000422338 1798 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SNORA38-201ENST00000363946 132 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 RNU6-115P-201ENST00000364310 107 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 RN7SKP226-201ENST00000364912 300 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SNORD51-201ENST00000384320 80 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SNORD116-23-201ENST00000384645 92 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 MIR325-201ENST00000385260 98 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 AL158050.1-201ENST00000416077 457 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 USP12PX-201ENST00000432383 1057 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 MTND2P3-201ENST00000452458 470 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 ANKRD26P4-201ENST00000455755 950 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 GTF2IP12-201ENST00000456547 356 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 CDC42P1-201ENST00000456658 548 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 AC084024.2-201ENST00000503480 791 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SNORA76.2-201ENST00000517095 137 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 OR4H6P-202ENST00000603819 340 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 PISRT1-201ENST00000626175 531 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 AP003399.1-201ENST00000637534 361 ntBASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC112Q8NEF3 DEFB108F-201ENST00000344638 222 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AL139098.1-201ENST00000407291 389 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 SNORD23.1-201ENST00000408212 104 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 RNU4-27P-201ENST00000410889 139 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 FCF1P2-201ENST00000415284 583 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC008173.1-201ENST00000418901 264 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC003685.2-201ENST00000422795 395 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 HMGN2P3-201ENST00000433603 273 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 HMGN2P5-201ENST00000436882 273 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC090453.1-201ENST00000495560 436 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 SUMO2P6-201ENST00000505273 288 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 ARL2BPP5-201ENST00000523141 481 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 DEFB108D-201ENST00000527787 222 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC118942.1-201ENST00000529674 1035 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC135628.1-201ENST00000568867 534 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 MTCO1P40-201ENST00000574371 625 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 MIR3921-201ENST00000577308 85 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 MIR3616-201ENST00000584070 92 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 RN7SL622P-201ENST00000585292 275 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC105224.1-201ENST00000587055 421 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AC010378.1-201ENST00000619270 362 ntBASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC112Q8NEF3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 RNU6-920P-201ENST00000410926 92 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AC002542.1-201ENST00000440683 193 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 GPM6BP3-201ENST00000442797 145 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AL592447.1-201ENST00000447592 540 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AL050341.1-201ENST00000447743 313 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 NDUFA5P7-201ENST00000452914 242 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 TRGVB-201ENST00000453257 471 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 RPL23AP41-201ENST00000484754 458 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AC006499.2-201ENST00000513470 337 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 RNU6-1102P-201ENST00000516149 96 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AC015688.2-201ENST00000584523 262 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AC090132.2-201ENST00000615881 347 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 AL356266.1-201ENST00000623311 483 ntBASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 DDX10P1-201ENST00000448545 1933 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms